Panicum virgatum (switchgrass): 120659653
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Entry
120659653 CDS
T07260
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00750
Vitamin B6 metabolism
pvir01100
Metabolic pathways
pvir01240
Biosynthesis of cofactors
Module
pvir_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
120659653
Enzymes [BR:
pvir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
120659653
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NMO
Motif
Other DBs
NCBI-GeneID:
120659653
NCBI-ProteinID:
XP_039793799
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Position
2K:complement(30389..31731)
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AA seq
319 aa
AA seq
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MASDGNGSGVVTVYGNNGAALLEPSKQSKSATFSVKVGLAQMLRGGVIMDVVTPEQARIA
EEAGACAVMALERVPADIRAQGGVARMSDPGLIREIKRAVTIPVMAKARIGHFVEAQILE
AVGVDYVDESEVLTLADDAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGEAGT
GNVIEAVRHVRSVMGDIRALRNMDDDEVFAYAKRIAAPYDLVMQTKQLGRLPVVQFAAGG
VATPADAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPNILADVSAGLGEA
MVGINLADPKVERFAARSE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgacggcaacggcagcggcgtggtcactgtctacggcaacaacggcgccgcc
ctgctggagccctccaagcagtccaagtcggccaccttctccgtcaaggtgggcctggcg
cagatgctgcgcggcggcgtcatcatggacgtcgtcacgccggagcaggcgcgcatcgcc
gaggaggccggggcctgcgccgtcatggcgctggagcgcgtccccgccgacatccgcgcg
cagggcggcgtggcgcgcatgtccgacccgggcctcatccgcgaaatcaagcgcgccgtc
accatcccggtcatggccaaggcgcgcatcggccacttcgtcgaggcccagatcctggag
gccgtcggcgtcgactacgtggacgagagcgaggtgctcaccctcgccgacgacgcgcac
cacatcaacaagcacaacttccgcgtccccttcgtgtgcggctgccgcgacctcggcgag
gcgctgcgccgcatccgcgagggcgccgccatgatccgcaccaagggggaggccggcacg
ggcaacgtcatcgaggccgtgcgccacgtccgctccgtcatgggcgacatccgcgcactc
cgcaacatggacgacgacgaggtcttcgcctacgccaagcgcatcgccgcgccctacgac
ctcgtcatgcagaccaagcagctgggccgcctccccgtcgtccagttcgccgccggggga
gtcgccacgcccgccgacgccgcgctcatgatgcagctcggctgcgacggcgtcttcgtc
ggctccggcatattcaagagcggcgaccccgcgcgccgcgcccgcgccatcgtccaggcc
gtcacgcactacagcgaccccaacatcctggccgacgtcagcgccgggctcggggaggcc
atggtcggcatcaacctggccgacccaaaggtggagcgattcgctgccagatccgagtaa
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