Panicum virgatum (switchgrass): 120659748
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Entry
120659748 CDS
T07260
Name
(RefSeq) KH domain-containing protein SPIN1-like
KO
K14945
protein quaking
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120659748
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120659748
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
120659748
NCBI-ProteinID:
XP_039793908
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All DBs
Position
2N:complement(11643617..11649841)
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AA seq
238 aa
AA seq
DB search
MQVLPICSRLLNQEIMRVSSMVHDHGFSDFDRRRFRSPSPMSSPIVRPNLHGNGFGPWNG
IPQERLVFPPPGTSMDWQGAPPSPGSYIVKKIIRLEVPVDSYPNFNFVGRILGPRGNSLK
RVEASTGCRVFIRGKGSIKDTEKEEKLKGKPGYEHLNEPLHILIEAELPANIIDTRLRQA
QEVMEELLKPVDESQDFYKRQQLRELAMLNSTLREDSPHPGSVSPFSNGGMKRAKPSQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgctgccgatatgcagccggctgctcaaccaagaaatcatgcgtgtatcaagc
atggttcacgaccatggattcagcgattttgacaggcgtcggtttagaagtcccagtcct
atgtcttcaccaattgtccggcctaatctacatggcaatggatttggtccttggaatggg
ataccccaagagagattggtatttcctcctcctggaacaagtatggactggcaaggagca
ccaccaagtcctggctcttatattgtgaagaagattatacgcttggaagttcccgtcgac
tcctacccaaatttcaattttgtggggcgcattctaggtccaagaggtaattctctaaag
cgggtggaagcatcaactggctgccgtgtttttattagagggaagggttccattaaagat
acagaaaaggaggagaagcttaaaggaaaacctgggtatgaacatttaaatgagccactg
catatattgattgaggctgagttaccagcgaatatcattgatacaagactgagacaggca
caagaggtcatggaagaactgctaaagccagtggacgagtcacaagatttctacaaaagg
caacaacttagggaactggccatgctaaactcaactctgagagaagatagtcctcatcct
ggaagtgtctctcctttcagtaatggtggcatgaaaagggcgaaaccgagtcagtag
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