Panicum virgatum (switchgrass): 120659768
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Entry
120659768 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E-like isoform X1
KO
K03250
translation initiation factor 3 subunit E
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120659768
03051 Proteasome [BR:
pvir03051
]
120659768
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120659768
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-3
120659768
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120659768
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120659768
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
RPN7
Motif
Other DBs
NCBI-GeneID:
120659768
NCBI-ProteinID:
XP_039793926
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All DBs
Position
2N:complement(12061377..12064943)
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AA seq
441 aa
AA seq
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MAEHDLTARLAPHLDRHLVFPLLEFLQERGLYPEEEVLAAKLRLLGGTNMVDYAMAIHRS
LHGTGEAPGDMAARRAEVVDRLVALQTGPVLPLYAFLRDPQLVQLLRPDKQYNVNMLQER
FQIGPDQIEALYDDAKFQFECGSYSDAAAYLYHYRVLSTNSERSVRALWGMLASGILNRN
WDAALEELNRLKEIIDSKNFSSPLNQLQNRIWLMHWSLFIFFNHENGRNGIIDLFFQDRY
LNAIQTNAHHLLRYLAIAVVVNKRRRNMLKDLIKVIQQEQRSYKDPVTEFLECLYVNYDF
DGAQQKLMECEQVILNDPFLGKRIEIGNSVTVPLRDEFFENARLFIFETYCRIHRCIDIS
ILAEKLNMRYSEAELWIMNLVKGLKLDAKIDSVSRTLIMRVNRGDVHEEIIESLKNLNTR
TYMLAQSIVEPAQASQTAHGD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcacgacctgacggcgcgcctggcgccgcacctcgaccgccacctggtgttc
ccgctgctggagttcctgcaggagcgggggctctacccggaggaggaggtcctggccgcc
aagctccgcctcctcggcggcaccaacatggtcgactacgccatggccatccacaggtcg
ctccacggcaccggcgaggcccccggcgacatggcggcgcgccgcgccgaggtcgtcgac
aggcttgtggcgctccagacgggccccgtgctgccgctctacgcgttcctgcgggacccg
cagctcgtgcagctgctcaggccggacaagcagtacaacgtcaacatgctccaggagcgc
ttccagattggtcctgatcagattgaagccttgtatgatgacgctaaatttcagtttgag
tgtgggtcctattctgatgctgcggcctacctctaccactatcgtgttttgtccacaaac
agtgagaggagtgtcagagctttatgggggatgttggcatcagggattctgaatcgaaac
tgggatgctgcgctcgaagagcttaatcgcttaaaagagattatcgattcaaagaacttc
tcatcacctctgaatcagctccagaataggatatggctgatgcactggagtctctttatc
ttctttaaccatgaaaatggtcgaaatgggatcattgatctgttcttccaagacagatac
ttgaatgctattcagacaaatgcacaccatcttctgagatacctagctattgcagttgtt
gtgaacaaaaggagaaggaatatgcttaaagatctgattaaagtcattcagcaggaacag
cgtagctacaaagaccccgtaactgaattcctggaatgcttgtatgtgaactatgatttt
gatggtgcgcaacagaaattaatggagtgtgagcaggttatattgaacgatccttttctg
ggaaagcgcattgaaataggaaattccgtcactgttcctttgagagacgaattctttgaa
aatgcccgtctgtttatttttgagacctactgccgcatacatcggtgcatcgatattagc
attcttgcagaaaagctgaacatgaggtacagcgaggcggaattgtggattatgaacttg
gttaaaggtttgaaactggatgccaagattgattcagtgtcaagaactcttatcatgagg
gtcaaccgtggtgatgtgcatgaggagattatcgagagcttaaagaatcttaacacgcgg
acctacatgctagcgcaaagcattgttgagccggctcaggcatcacagacagctcatgga
gattag
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