Panicum virgatum (switchgrass): 120659769
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Entry
120659769 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit E-like
KO
K03250
translation initiation factor 3 subunit E
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120659769
03051 Proteasome [BR:
pvir03051
]
120659769
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120659769
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-3
120659769
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120659769
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120659769
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
RPN7
EIF3E_C
TPR_9
TPR_20
TPR_19
TPR_14
LpxD
Motif
Other DBs
NCBI-GeneID:
120659769
NCBI-ProteinID:
XP_039793928
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All DBs
Position
2N:12131715..12135387
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AA seq
438 aa
AA seq
DB search
MAEHDLTALLAAQMDRHLVFPLLEFLQERQLYSEPEILEAKIRLLSGTNMVDYAMDIHKS
LHGTDDVPEDMVRRRAEVVSRLRSLEEAAAPLVTFLQNPQLVQELRPDKQYNIHMLQDRY
QIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSVSALWGKLAAEILMQNW
DVALEELNRLKEIIDSKNFSSPLNQLQNRIWLMHWALFIFFNHENGRNGIIDLFFQDRYL
NAIQTNAHHLLRYLATAVVVNKRRRNMLKELIKVIQQEQHSYKDPITEFLECLYVNYDFD
GAQQKLMECEQVILNDPFLGKRIEGNFVTVPLRDEFLENARLFIFETYCRIHRCIDISML
AQKLNMSYDEAELWIMNLVRSSKLDARIDSVSGTLIMTTNHVNVHEQIIESLKGLNMRTY
MLAKNIVEPAQAAQQAAR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcacgacctcaccgcgctgctggcagcgcagatggaccgccacctggtcttc
ccgctgctggagttcctgcaggagcggcagctctactcggagccggagatcctcgaggcc
aagatccgcctcctcagcggcaccaacatggtcgactacgccatggacatccacaagtcg
ctccacggcaccgacgacgtccccgaggacatggtccgccgccgcgccgaggtcgtctcc
aggctcaggtcgctcgaggaggccgccgccccgctcgtcaccttcctccagaacccgcag
ctcgtgcaggagctcaggcccgacaagcagtacaacatccacatgctccaggatcgatac
cagattggtcctgatcagattgaagctctgtatcagtatgccaagtttcagtttgagtgt
ggtaactactcgggggctgctgactacctttaccagtatcgtgctttgtgcacaaacagt
gagaggagtgtgagtgccctttggggaaagctggcggcagaaatcctgatgcagaactgg
gatgtagctttggaagaactcaaccgcttgaaggaaataattgattcaaagaatttctca
tcaccccttaaccagctccagaacaggatatggctgatgcattgggctctcttcatcttt
tttaaccatgaaaatggtagaaatgggatcattgatctgttcttccaggacaggtacttg
aatgctattcagacaaatgcacaccaccttctgagatacctagctactgcagtggttgtg
aacaaaaggagaaggaatatgcttaaagagctgattaaagtcattcagcaggagcagcat
agctacaaggatcctataactgaatttctggaatgcttatatgtcaactatgattttgat
ggtgctcaacagaaactcatggagtgcgagcaggttatattgaatgaccctttcctggga
aagcgcattgaaggaaattttgttactgtccctttgagagatgagttccttgaaaatgct
cgtctgtttattttcgagacttactgccgtattcatcggtgcattgatatcagcatgctt
gcgcagaagcttaacatgagctatgatgaggcagagttgtggataatgaacttggttagg
agctcaaaactggatgccaggattgattcagtgtcaggaacccttatcatgacgaccaat
cacgtcaatgtgcatgagcagattatcgagagcttgaagggccttaacatgcggacctac
atgctagcaaagaacattgtggagccagctcaagcagcacagcaggcagctcggtga
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