Panicum virgatum (switchgrass): 120659814
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Entry
120659814 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120659814
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120659814
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
120659814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
120659814
NCBI-ProteinID:
XP_039793989
LinkDB
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Position
2N:complement(13500590..13506272)
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AA seq
496 aa
AA seq
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MSARREIVSYHPLPAPGVVNSLKDEFQSRVMETVGNAINSFDPKSLPQHIERGLGTAGNI
INSFEPKWSGQKEFDFGGEADFLDGYQCPDKYWGSAPVKAQKPVNIKNLLGGVMAIIGRN
LKNTEDEHPKDNKTSVSFLGSSDDGNTFLHSSVYMPSAPPVLDEEALNYNIYRAVLEAEP
PEWLPDSYASSCMQCAAPFTAVTRGRHHCRFCGGIFCRACSKGRCLLPAKFRERNPQRVC
DACYDRLDPLQNLLINSVSNASQTAKHDVMDWTCARGWLNLPIGLTMEHEIYKAANTLTS
YSQVARINPEKSIPHAVLSGASGLAILTVVKAGAILTYKLGTGLVVARRSDGSWSAPSAI
LSGGFGWGAQVGGELMDFIIVLRGPEAVQTFCSRMHFSLGAGVSAAAGPVGRVLEADMRA
GDKGSGVCYTYSCSKGAFIGISLEGNLVATRMDANLRFYGDPYLTTSDILMGNVERPNAA
KILYTALDDLYSGLDC
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacgtagggagattgtctcctaccacccgttgcctgcaccaggagtagtgaac
agcctcaaggatgagttccagtcgagagttatggaaacggttggcaatgcgatcaactca
tttgatccaaagtcgttgcctcagcatatagaaaggggattgggaacagctggaaacatc
attaattcatttgagccaaaatggtctggccaaaaggagtttgattttggtggggaagct
gatttccttgatggatatcagtgccctgataagtattggggttctgcgccagtgaaggcg
caaaagccagtaaacattaagaacctgctgggcggtgtaatggcgatcattggtcgcaat
ttgaaaaatactgaagatgaacatccaaaggacaataagactagtgtctcttttctgggg
tcaagtgatgatgggaacacattcttgcattcttctgtctacatgccaagtgccccacca
gttcttgatgaagaagccttgaattacaacatttatagggctgttctggaagcagagcca
ccagaatggcttcctgatagctatgctagctcgtgcatgcagtgcgctgctcctttcact
gctgttacccgaggacgacatcattgccgattctgcggagggatattctgcagggcatgc
tcaaaaggaagatgtctgttgcctgccaagttccgtgagcggaatccacagagagtttgt
gatgcttgttatgataggctagatccattgcagaacttattgatcaattctgtcagcaat
gcctcacaaaccgcaaagcatgatgttatggattggacttgtgcaagagggtggttaaat
ttgcctattgggttaacaatggagcatgagatttacaaggcagcaaataccttgacaagt
tacagccaggttgcaagaataaaccctgagaagtccattccacatgcagtacttagtgga
gcaagtgggcttgccatattgacagttgtaaaagctggtgctattcttacttacaaactt
gggactggcctagtagttgctcgaagatctgatgggtcatggtctgcaccatctgctata
ctttctggtggttttggatggggagcgcaggttggtggtgagctaatggatttcattata
gtgcttcgaggtccagaagctgtccaaacgttctgcagtcgaatgcatttttcactaggg
gcaggtgttagtgctgcagcaggacctgtgggcagagtattagaagcagacatgagagct
ggtgataaagggtcaggagtttgttatacatatagctgcagcaaaggtgctttcatcggt
atttcattagaagggaatctagttgccacacggatggatgctaatctgcggttttacggg
gacccctatctaacaaccagcgacatcctcatggggaatgtggaaaggccaaatgctgcc
aagattctttacaccgcactggatgatctctactccgggctggattgctag
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