Panicum virgatum (switchgrass): 120659816
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Entry
120659816 CDS
T07260
Name
(RefSeq) chromatin assembly factor 1 subunit FSM-like isoform X1
KO
K10750
chromatin assembly factor 1 subunit A
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120659816
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120659816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1A_dimeriz
Cac1_C
Tsp36_N
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
120659816
NCBI-ProteinID:
XP_039793991
LinkDB
All DBs
Position
2N:complement(13531932..13539727)
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AA seq
828 aa
AA seq
DB search
MDGDEAKESALDCASSAATAMCPDASCEHESTESAMKQQKRKRAFSQVDVVDKESVSAEW
QRALDALYEYYKEVSGHHVKPEEFACLTGDSIIACLLEESSLPCAKLTDKIYKRFKLQDG
VTVSSVRNSVLHIGKRSSYGICAIDVDELEDESDSSLWCWETQDLALLPSHLRNGLSIRR
TARKLIHERILALSGKLAAKDAPTTHSKEDSHSVNAVEVPNLDEICSFIEKSKQKNDADI
TKMHSKAKAQELQATRKAMKEHQMMARQIEKEEKKKDRELKHMKEKAEREAKRIERSNKR
LKKHQEEAERAKKRKEKEEAELKRKASTKKQANFMECLFIKKLNSIMESSSSHHLEKTTC
SKSSGSIEEPFIAVTSAMDCTLSQVNHLRVEEFWVAHVSRWQKLSHHNILHHWGVRRSPK
VQLFSELKLQKSSATAHSDNMSTPTKEQSSQESTGSLDFNKLLDELKTPSHEKNIPFRTV
QNSISSSVLSVKKLLQFDRSFRPAYYGTWRKKSSTVSARQPFQRDPELNYDVDSDEEWEE
EDPGERLSDSEEEDKTKNEDDSMIDVEEETENSFVVPNDYLSEDEGVQYEPVCVKVDETC
SMLSNPRVTVEQKFLHSATEDALRIDRPLVISNLDHRKFDLLRAEENPAERRLCLQALCM
KKYSSGPIIDVPMVVKVIMEDTTFCQSNKKSPRTPVPSKSISDSDMPEFAKLVTSCSQGM
GKLVELLHERFPCVSRTQLKNKVREIAEFIHNRWQVKKDILDQYSICLSPDKVGSHKCAG
PQSSQQCVSPDEPGKTGQCAPHSALKSEASRQQMSAKGSSGSAPCADP
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgatgaagcgaaggaatcagctctggattgtgcatccagtgcagccactgct
atgtgtcctgatgcctcctgtgagcatgaatcaacagagtcagccatgaagcagcagaag
aggaagagggccttctctcaagtggatgttgtggataaagaatcggtatctgctgaatgg
cagcgagcacttgacgcattgtatgaatactacaaggaggtttctggtcatcatgtgaag
ccagaggagtttgcatgcttgacaggcgactcgattatagcatgcttgctggaggagagc
agtcttccctgtgcaaagttaacagataagatctacaaaaggtttaaactacaagatggc
gtcactgtctcttcagtgcgcaactcagtgctccacattggtaagagatcttcttatggg
atttgtgctatagatgtcgatgaactggaggatgagtctgattcaagcctttggtgttgg
gagacacaagatttggcattgttaccctcgcatctacgtaatggtttaagcattcgacgg
acagctcggaagcttatccatgaaaggattctggctctttcaggcaagctggctgcgaaa
gatgctcctactactcatagtaaggaggactctcattcagtaaatgctgtggaagtgcca
aatctggatgagatttgctctttcattgagaagtcaaaacaaaagaatgatgctgacata
actaaaatgcacagcaaagcaaaagcacaagagttacaagctaccaggaaagccatgaag
gaacatcaaatgatggcgaggcagattgaaaaggaggaaaagaaaaaagatagggaactt
aaacatatgaaagaaaaagctgagagggaagcaaaacgtatcgagagaagcaataagcgg
ctaaagaagcatcaggaagaagcagagagggcaaagaagaggaaagagaaggaagaggct
gagttgaaaaggaaggcttccactaaaaaacaagcaaacttcatggaatgtctgttcata
aaaaagctgaatagcatcatggaaagttctagtagtcaccacttggagaagactacatgt
tcaaaatcatcaggatctattgaagaacctttcattgcagttacatcagcaatggactgt
acactatctcaagtaaatcatttgagagtggaggaattctgggtggcacatgtttctaga
tggcaaaaactctctcaccataacatattgcaccattggggtgttaggagaagtcctaag
gttcagttgttttctgagctaaagctacagaagtcatctgcaactgcacattctgataat
atgtcgactccaacaaaagagcagtcatcacaggagagcacaggaagccttgatttcaac
aaacttcttgatgaactgaaaacgccatctcatgagaaaaatatcccgtttagaacagtt
cagaatagcatatcatcttcagttctttccgtgaagaagcttttgcagtttgatagaagc
tttaggccagcatattatggtacctggagaaagaagagttctacagttagtgcaaggcaa
ccctttcagagggatccagaactcaattacgatgttgatagtgatgaagaatgggaagag
gaggatcctggtgaaagattatctgattctgaggaagaagataagactaagaatgaagat
gattccatgattgatgtggaagaggaaactgagaacagttttgtagtgcctaatgattat
ctttcagaggatgagggcgtgcaatatgagcctgtatgtgtcaaagttgatgaaacctgc
agcatgctgagcaaccctagggttacagttgagcagaaatttcttcatagtgccactgaa
gatgctctcaggatagacaggcctttagtcatatccaacctagaccatagaaaatttgac
ctgctgagagctgaagaaaatcctgcagagagaagactctgtttgcaagctctttgtatg
aagaaatactccagcggccccatcattgatgtgcctatggttgttaaagtgataatggaa
gatacaacattttgccaatcaaataaaaagagccctagaacacctgtaccatccaaatcc
atttcagattcagacatgcctgaatttgccaaactagttacatcatgctctcaagggatg
ggcaaattggtcgagctattacatgagagatttccatgtgtctctaggacacaactgaag
aacaaagttcgggagatagctgagtttatccacaaccgctggcaggttaagaaagatatc
ttggatcagtacagtatatgtctctctccagataaagttggaagccacaagtgtgcaggg
ccacagtcctcccaacagtgtgtgtcgcctgatgaaccaggaaagacaggccaatgtgct
ccccattccgccctgaaatctgaagcgagcagacaacaaatgagtgccaaaggttccagt
ggcagcgcaccgtgtgctgatccttga
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