Panicum virgatum (switchgrass): 120659826
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Entry
120659826 CDS
T07260
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 3
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120659826
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120659826
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120659826
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120659826
NCBI-ProteinID:
XP_039794005
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Position
2N:13738853..13743590
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AA seq
224 aa
AA seq
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MDNLNTHSEQANQPQGQQANGLPLDIPTSQVLDSHMIEQQSRNQTPQLFSLEQHRLQLGQ
VLQLCNEQVQVSQQQEISIQNATLSNVLTTDVLLLNVEEIASMRLELQRIREDQETSRHA
WDQLLHLVVAVYETKEALIRMIATLQQERNSHVSGPGDEASSVVRTAAETTNTDRTCMVC
NSGGASMMLLPCKHLCTCKPCAVHLRACPICGALKNDAIETPFI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggacaaccttaatacccattctgaacaggccaatcaacctcagggacaacaagcaaat
ggccttcctttggatataccaacaagtcaggtcttagatagtcatatgattgaacaacag
agcagaaatcagacgccgcaattgttctcccttgagcagcacaggctgcagttgggtcag
gttctccaactctgcaacgagcaggttcaggtgtcgcagcagcaggaaatttctatacag
aatgcaactctatcaaatgttctgacaaccgatgtgctgctcctgaacgttgaagagata
gccagcatgcgcttagagttgcaaaggatccgagaggatcaagaaacttcacggcatgct
tgggatcaattgctgcatcttgttgttgctgtgtatgaaacgaaggaggcacttatcaga
atgattgctacgttgcagcaggaaagaaattcgcatgtttcaggccctggagatgaagca
tcaagtgtggtgagaaccgcagcagagacaaccaatactgatcgtacttgtatggtttgc
aactctggtggtgccagtatgatgttgctgccgtgcaagcacctctgcacctgcaagcca
tgtgcagtccatctcagggcttgccctatctgcggtgctctgaagaatgatgcgatcgag
accccattcatatga
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