Panicum virgatum (switchgrass): 120659845
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Entry
120659845 CDS
T07260
Name
(RefSeq) acidic endochitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120659845
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120659845
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GFIT
Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
120659845
NCBI-ProteinID:
XP_039794035
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Position
2N:complement(14387633..14388843)
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AA seq
297 aa
AA seq
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MATRSSLVQLLLIAVAAAQIVGSHGGGISIYWGQNGGEGALADTCATGNYKFVNLAFLAA
FGNGQPPVLNLAGHCDPTSGGCTGLSADIKSCQSSGVKVMLSIGGGAGSYYLTSAADAKD
VATYLWNNFLGGHSSSRPLGDAVLDGIDFDIEGGTNQHWDDLARYLKVYSNSGRRVYLTA
APQCPFPDAWMGGALNTGLFDYVWVQFYNNPPCQYSSGSTTDLADAWKQWLSIPAKQIFL
GLPASPQAAGSGFIPADDLKSQVLPLIKSSGKYGGIMLWSKYYDDQDGYSSSVKNDV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagatcatcgctggtgcagctgctgctcatagcagtggctgctgcccagatt
gttgggtcacacggtggcggcatttccatatattggggtcagaatggtggcgagggcgca
ctggccgacacctgcgccaccggcaactacaagttcgtcaacttagccttcctcgcagca
tttggcaatggccagcccccagtgctcaacctggcaggccactgtgacccgaccagtggt
ggctgcaccggtctgagcgccgacatcaagtcgtgccagagcagcggtgtgaaggttatg
ctatcaattggaggcggtgcaggcagctactaccttacatcagctgcggatgccaaggat
gtagccacatacctgtggaacaacttcttaggtgggcattcctcatctcgtcccctgggt
gatgcagttcttgacggcatagacttcgacatcgagggcggcaccaaccagcactgggat
gatcttgcaaggtacctgaaagtgtacagcaactccggcaggagggtgtacctgactgct
gcgcctcagtgcccgttccctgatgcctggatgggtggtgccctcaacactggcctgttt
gactacgtctgggtgcagttctataacaacccaccctgccagtacagctcaggcagcacc
acggatcttgcagatgcatggaagcagtggttgtcgattccggcaaagcagatctttctt
ggcctgcctgcttcaccacaggcagctggaagcgggtttataccagctgatgatctgaag
tctcaggttctaccattgatcaagagctctgggaaatatggtgggatcatgctgtggtcc
aagtactatgatgaccaagatggttacagttcctcagtcaagaatgatgtttaa
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