Panicum virgatum (switchgrass): 120659857
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Entry
120659857 CDS
T07260
Name
(RefSeq) myosin-6-like isoform X1
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120659857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120659857
04131 Membrane trafficking [BR:
pvir04131
]
120659857
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120659857
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120659857
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120659857
mRNA cycle factors
P-body specific factors
120659857
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120659857
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120659857
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120659857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
DUF5082
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
120659857
NCBI-ProteinID:
XP_039794047
LinkDB
All DBs
Position
2N:complement(15954457..15991114)
Genome browser
AA seq
1530 aa
AA seq
DB search
MASNVRFTVGSQVWVEDADLAWIDGLVEEVQGDELIINCSSGKKVTANVSSVYPKDAEAK
RCGVEDMTRLAYLNEPGVLQNLKSRYAMNEIYTYTGNILIAVNPFQRLPHLYNNHMMGIY
KGAEFGDLSPHPFAIADRAYRLMINYGKSQAILVSGESGAGKTESTKSLMQYLAFMGGKA
QSGGRSVQQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQNGKISGAAIRTYLLE
RSRVCQISDPERNYHCFYMLCAAPPEDRERYKLGDAASFHYLNQSSCIKLDAMDDASEYI
TTRRAMDIVGISSDEQDAIFRVVAAILHLGNVEFSEGSEADSSVPKDEKSQFHLKTAAEL
FMCDEKGLEESLCKRVMATRGESIVKILDARAAALSRDALARIVYSRLFDWLVNKINSSI
GQDLSSKLLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEID
WSYIQFVDNQEILDLIEKKPGGIIALLDETCMLRNSTHEIFAEKLYQKFKGNPHFSRPKF
ARSDFTIHHYAGNICIAPEEKVMKEKLWHMFIFLFLVTYQTDLFLDKNIDYAVNEHQVLL
NASRCSFVSSLFPPSEESIKSTKFTSIGSSFKQQLQALLETLSATEPHYIRCIKPNNVLK
PAIFENSNVLQQLRCGGVLEAIRISCLGYPTRRRFDEFVDRFGVLLPEVLGESYDEVTAT
NMLLEKANLTGYQIGKTKVFLRAGQMAELDALRTEVLGRSATKIQRKVRSYLARKNFIQL
RISATHLQAICRGQIARHHYEDLRRQAASLTIQACYRMHFARKNYRNLCSASTTIQSGLR
GMAARNELHFRLQTKAVVIIQSFWRSYGARSRYTSLKKAAVTTQCAWRGRVARKELRKLK
MAAKETGALQAAKNKLEKQVEELTWRLQLEKRIRTDMEEAKTQENRKLQQQLQELQLQSK
ETKDLLKREQEIAKEALEKAALVPEVKVDTTLVDKLTTENENLKALVGSLETKIDETEQK
FEEMKKAREEWMKKAADAKSKINELTNTMLSFQEKVTTMEAENQLLRQQALLRTPVRTIP
ENSSPKSNLTNGSPRSEQTTPHGTPPAPKEYGSFAQPRASFFERQHESVDALINCVSENI
GFSEGKPVAAITIYKCLVHWKIFETEKTSVFDRLIQIFGSAMQKHDSNEDLAYWLSNSST
LLIMLQKSLKAAGTTGTSPLKRPQTQSSFLGRMVFRSSNITVDMDLVRQIEAKYPAFLFK
QQLSAFVEGLYGMICDNLKKDLSSLLSYAIQVPRTVKASMVRGRSFGSSSLPRGRSFSNQ
ASYWQAMVDNLNELLKILQDNCVPSIFIRKIFTQVFSFINSQLFNSLLVRHECCSFSNGE
YVKQGLAQLEAWCGEVKPEYAGSALDELRHIRQAVGFLVIFKKFRISYDEIVNDLCPVLS
VQQLYKICTQYWDDKYNTESVSEEVLEEMRTLITKESNQDNLENTFLLDDEISMPISLEE
IADSMDAKEFQNVTSPQELTSMHAFQFLKS
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaatgtccgttttacagtgggttctcaagtttgggttgaggatgcggatttg
gcttggattgatgggctggtggaggaggtccagggagatgaattaataataaactgcagt
tctgggaagaaggttactgccaatgtctcaagtgtgtatcctaaggatgcagaagcaaag
cgctgtggtgttgaggatatgacaaggctggcttatctgaatgaaccaggggttctacaa
aacttgaagtctagatatgcaatgaatgaaatatatacttatactggtaacatattaata
gctgtcaacccatttcaaagacttccacacctttacaacaatcacatgatgggaatttat
aaaggagcagaattcggcgacctgagcccacatccttttgccatcgcggaccgtgcatat
aggcttatgattaattatggtaaaagccaagccatattagtgagtggtgaaagtggagct
ggtaagacagaaagcactaaaagtcttatgcagtatcttgcatttatgggtggcaaggct
caatctggaggaaggtcagtgcaacaacaagtactggagtccaatcctgttcttgaggca
tttggaaatgcaaaaacagtcaggaataacaattcgagtcgtttcggcaaatttgttgag
atccagtttgaccagaatgggaagatttcaggagctgccataaggacttacctccttgaa
agatctcgtgtctgtcaaatatctgatccagaaaggaactatcactgcttttacatgctt
tgtgctgcaccacctgaggaccgtgagagatataaattaggagatgctgcatcatttcac
tatcttaatcagtctagttgcattaaacttgatgcgatggatgatgcttcagaatatatc
acaactaggagggcgatggatattgtgggcattagttctgatgaacaggatgcaatattt
agagttgtagctgctattcttcatttgggcaatgtggaattttcagaagggagcgaggca
gattcttctgtacccaaagatgaaaaatcccagttccatcttaagacagctgcagagctt
ttcatgtgtgatgaaaagggtcttgaagaatctttgtgtaagcgtgttatggcaacacgt
ggtgaaagtattgtgaaaattttagatgcacgagcagcagctcttagtagagatgcattg
gccagaattgtttactctcgtttgtttgattggcttgtaaataagatcaatagttcaata
ggacaagatctgagctcaaagcttctgattggtgtgctggatatatatggttttgagagt
ttcaagacaaacagttttgagcagttctgtatcaacttaactaatgagaagctgcagcaa
cactttaatcagcacgtgtttaagatggagcaagaagaatatacgaaggaagaaattgat
tggagttatatccagtttgtggacaaccaagagattcttgatcttattgagaagaaacca
gggggtataattgctctactggatgagacttgcatgttgcgaaattcaacccatgaaata
tttgctgaaaagctttatcaaaaatttaaaggcaacccgcacttcagtaggccaaaattt
gcgcggtctgatttcactattcatcactacgctggaaatatatgcattgcaccagaagaa
aaggtgatgaaagagaagttgtggcacatgttcatcttccttttcttggttacatatcaa
acagatctgttcttggataagaacattgattatgctgtgaatgagcatcaagttttatta
aatgcttctagatgttcatttgtttcaagtcttttcccaccttctgaagaatcaattaaa
tccacgaaatttacatcgataggttcgagctttaagcaacaattacaagcgttgctggaa
actctgagtgcaacagaaccacattatatacgctgcataaagcccaataatgttctcaag
ccagcaattttcgagaacagtaatgttctccagcaactacgatgtgggggagtattagag
gcgataaggataagctgtctaggatatccaacgaggcgtagatttgatgaatttgttgat
cgttttggtgtcttgctacctgaagtacttggtgaaagttatgatgaagttactgctaca
aacatgctccttgagaaagccaatctcacaggctatcagatagggaaaactaaagtgttt
ctgcgggctggtcaaatggctgagttagatgctctgagaactgaggtgttgggccggtct
gctaccaaaatccagagaaaagttcggtcttacctggctcgcaaaaatttcattcaactt
cgaatatctgctacccatcttcaggctatttgcagaggacaaattgcaagacatcattat
gaagatctccgcaggcaggctgcttcattgacaatacaagcctgctatcgtatgcacttt
gcaaggaagaactacagaaatctctgttccgcatcaactactatccaatctggtctacgt
ggtatggctgctcgcaacgaactccatttccgtctgcaaacaaaagctgtggtcattatt
cagagtttctggcgtagttatggagcacgctctcggtacacgagcttgaagaaggcagct
gttactacacaatgtgcttggagaggaagagttgccagaaaagaactccggaaacttaaa
atggctgctaaagaaactggtgctctccaagctgccaagaataaattagagaagcaagtg
gaggagctcacctggcgtctgcaactagagaaacgcatcaggactgacatggaagaagct
aagacacaagaaaataggaagttgcaacaacaattgcaggaactacaattacaatccaag
gagacaaaagatctgttgaaaagggaacaagaaatcgcgaaagaagcactggagaaagct
gccttagtaccagaggtcaaagttgatacaactcttgttgataaactcactactgaaaat
gagaatctaaaggctttagtgggctctcttgagaccaaaattgatgaaacagaacaaaag
tttgaagaaatgaagaaagctagggaagagtggatgaaaaaagctgcagatgccaagtca
aagataaatgaactgactaacacaatgctaagttttcaagaaaaggtaaccactatggaa
gcagaaaatcaattacttcggcagcaggcactgttgcgtactcctgttagaacaataccc
gagaattcatctccaaaatctaatttgactaatggcagtccacgtagtgaacaaacgaca
cctcatggcacccctccagctcccaaggaatatgggagctttgcacagcctagggcatcc
ttttttgaaaggcagcatgagagtgttgatgcacttataaactgtgttagtgaaaatatt
ggctttagtgaaggaaagccagttgctgcaataaccatatataagtgtcttgtgcattgg
aagatctttgaaacagaaaaaacaagtgtttttgatcgtcttattcaaatttttggttct
gcaatgcagaaacatgatagcaatgaggatcttgcatactggttatcaaattcgtcgact
ttattgatcatgcttcaaaagagcctaaaagctgctggcacaacaggaactagtccactg
aagagaccacagactcagtcatcatttcttgggaggatggtattccgctcctcaaacatc
actgttgatatggaccttgtgcgccaaatcgaggccaagtatcctgcttttctttttaag
cagcaactttcagcatttgtggaaggcttatatggaatgatctgtgacaatttgaagaaa
gacctttcttctttgctgtcatatgctattcaggtcccaagaactgttaaagctagtatg
gtgagagggcgttcttttggatcgtcaagtttgccaaggggacgttcattttcaaatcaa
gctagttattggcaggcaatggtcgataatttgaatgaactcttgaaaattttgcaagac
aattgtgtcccatctatttttatccggaagatatttacccaggttttctcatttatcaat
tcacaacttttcaatagccttcttgtacgtcatgagtgctgctctttcagtaatggagag
tatgtgaaacaaggattggctcaactagaggcatggtgtggagaagtcaagccagagtat
gcaggatctgcattggatgaactcagacatatcaggcaagctgttggtttcttggtcata
ttcaaaaagttcaggatttcatatgatgagatagtcaatgatctctgcccagtactaagt
gtacagcagctctacaaaatatgcactcagtactgggatgacaaatataacacagagagc
gtgtcagaagaggtccttgaggagatgcgaacactgataaccaaggaatcaaaccaggac
aatctggagaacacctttttactggatgacgaaattagcatgcccatatcacttgaagag
atagcagattctatggatgccaaagaatttcagaatgtcacctcgccacaagaacttact
tcaatgcatgccttccaattcttgaagagctga
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integrated database retrieval system
