Panicum virgatum (switchgrass): 120659908
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Entry
120659908 CDS
T07260
Name
(RefSeq) non-lysosomal glucosylceramidase-like isoform X1
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00600
Sphingolipid metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120659908
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120659908
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
120659908
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Gene cluster
GFIT
Motif
Pfam:
DUF608
Glyco_hydr_116N
Bac_rhamnosid6H
Motif
Other DBs
NCBI-GeneID:
120659908
NCBI-ProteinID:
XP_039794104
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All DBs
Position
2N:complement(18035558..18051842)
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AA seq
964 aa
AA seq
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MPSGNLLSRRRRSWRANELVSRSTLQLLDFDDGSPPEHAWRRKLSSHANRLKEFNVTFRE
AIRMMKLGLRLWSYIREEASHGRLDNLPIGRKHQLIPSLERATDPQPHKEYLLVGWGVCD
IGLQPAFLSFCFQEHLLCTLNPFLCRSGSISRGFRGEFKNWQITPGYCEMSPVMANQFSI
FVTRGGNKKYASVLAPGQLDGLKKSSDDGISSWDWKLKGDRSTYHALFPRAWTVYDGEPD
PELKVSCRQISPFIPHNYEESSLPTSIFVYTLVNTGKERAKVSLLMTWANSIGGLSHHTG
GHVNEPFIGENGVSGVLLHHKTANNNPPVTFAIAACENQNVNVTVLPVFGLSGESSVTAR
GMWGTMIQDGSFDRDNFNAGASMPSSLGDTVCAAVSASTWVEPHGRCTIVFALAWSAPKV
KFKKGSTYYRRYTKFYGTSPRSAVNLVQDALMKYKHWEEEIDKWQTPILRDERLPEWYKI
TLFNELYFLVAGGTIWIDSESLVVDADTKSNSSPLEDSDSPLNDSTSNSTVPLIGFDPHE
IDDKENVGKFLYLEGIEYFMWCTYDVHFYASFALLDLFPKIELSIQRDFARAVLREDNSR
VRFLADGAWGIRKVIGAVAHDLGAHNPWHELNAYNIHDTSRWKDLNPKFVLQIYRDFAAT
GDMSFGKDVWPAVCTAMEYMEQFDHDGDGMIENDGFPDQTYDAWTVRGVSAYCGCLWLAA
LQAAAALARSLGHDDYAERCMTRFAKAKSVFEAKLWNGSYFNYDSGTSYNSRSIQADQLA
GQWYTASSGLPPLFEEDRIKCTLQKIFDYNVMRVKGGRMGAVNGMHPNGKVDETCMQSRE
IWTGVTYSLAATMLLHGMEHQAFTTAEGIYIAGWSEEGYGYWFQTPEAWTVDGHYRSLIY
MRPLAIWAMKQALSPPMWILEAPKVNTMDRAHISPGTFQFLQDRVRKMTPKNGCFGNTVF
NWDC
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcgggaacttgctttcccgcaggaggcgttcgtggcgtgccaatgagctcgtg
agcaggagcaccctgcaactgctggacttcgacgatggctcaccaccagagcatgcatgg
aggaggaaactaagtagtcatgctaatagattgaaagagttcaatgttacattcagagaa
gcaattagaatgatgaaacttggtctccgactttggtcatatattcgggaggaagcttct
catggaaggcttgacaacttaccaattggcagaaagcaccaattgatcccttcactagag
agagcaacagaccctcagcctcacaaggagtacctcttggtgggatggggtgtgtgtgat
attggtttacaaccagcctttctgtctttctgttttcaagaacatttactgtgtacactc
aatcctttcctctgcaggagtggtagcatttctagaggctttaggggagaattcaagaat
tggcagataactcctggttattgtgaaatgtctcctgtgatggccaatcaattttcgatc
tttgtcactaggggaggaaacaagaaatatgcttcagttttggcccctggccaacttgat
ggtttgaagaaatctagcgatgatggtatatcgtcctgggattggaaattaaagggcgat
cgttcgacataccatgctttgtttcctcgggcatggactgtttatgatggcgaaccagat
ccagagctgaaagtatcttgccgtcaaatatcgccatttattccacacaactacgaagag
agcagtcttcctacctctatttttgtatacactctagtgaataccggaaaggaaagggca
aaagttagcctattgatgacttgggcgaattccattggaggactttcacatcatactggt
ggccatgtaaatgagccattcataggagaaaatggagtttctggcgttcttctacatcac
aagacagccaataataatcctcctgtaacatttgcaattgcggcatgtgaaaaccaaaat
gtaaatgtcacagtattgcctgtttttgggctttctggagaaagttctgttactgccagg
ggaatgtggggcacaatgatccaggatggttcctttgaccgagataatttcaatgctggt
gccagcatgccttcttcactgggtgatacagtttgtgcagcagtttctgcttccacctgg
gttgaaccacatggaagatgtacaattgtatttgcgttggcttggtctgctcctaaggtt
aagtttaaaaagggaagtacatactacaggagatatacaaagttctatggaacttcgcca
agatcagctgtaaatttggtacaagatgctttgatgaagtataaacattgggaagaggag
atcgataagtggcagaccccaattctccgtgatgagaggcttccagagtggtacaagatt
actctctttaatgaactgtacttcctagttgctggaggaaccatttggattgatagcgaa
tccttggtggttgatgctgataccaagtcgaattcaagtccccttgaggatagtgattcg
ccacttaatgacagcacgagcaattctacagttcccctaatcggttttgacccacatgag
attgatgacaaagaaaacgttgggaagtttttgtacctggaaggaatagagtacttcatg
tggtgcacttatgatgtacacttctatgcctcttttgctcttttggatctgtttcctaag
attgaattaagcattcaacgtgattttgctagagctgttctgcgggaagataacagtaga
gtcagatttcttgctgatggtgcctggggtattcgtaaagtaattggtgctgtcgcccat
gaccttggagcacataatccgtggcatgaattgaatgcttacaacatccacgacacaagt
agatggaaagatcttaatcccaagtttgtgcttcagatttacagggattttgctgcaaca
ggtgatatgtcatttggcaaggatgtctggccagcagtttgtactgctatggaatatatg
gaacaatttgatcatgatggtgatggtatgattgaaaatgatggatttcccgatcaaact
tatgatgcttggactgttcggggagtaagtgcatattgtggttgcctttggcttgctgcc
cttcaagctgcagcggcactggcccgcagccttggacatgatgactatgctgagaggtgt
atgacaagatttgcaaaagctaaatccgtatttgaagccaagttatggaatggttcatac
ttcaattatgacagtggaacaagttacaatagccgttccatccaggcagatcagctggct
ggacaatggtatactgcttcgtcagggttgcctcctctatttgaagaggataggataaaa
tgcacgcttcagaaaatatttgactataatgtgatgagggtgaaaggaggacgtatggga
gctgtgaacggtatgcatccgaatgggaaggtagatgaaacctgtatgcagtcaagggaa
atatggacaggagtgacatatagtttagctgcaacgatgctgctccatggaatggagcat
caggcctttactactgcagaaggcatttatattgcaggatggtctgaagagggctatggg
tactggttccaaactccagaagcatggacggttgatggccactacagatcactgatatat
atgcgcccccttgcaatctgggcaatgaagcaggccttgtcccctccaatgtggatactc
gaggcgccgaaggtaaatacaatggacagggctcacatttctccgggcacattccagttc
ctccaggatagggtcaggaagatgacgcccaagaatggttgttttggaaacactgtattt
aactgggattgttga
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