KEGG   Panicum virgatum (switchgrass): 120659917
Entry
120659917         CDS       T07260                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
pvir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120659917
  09124 Replication and repair
   03420 Nucleotide excision repair
    120659917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120659917
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120659917
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     120659917
  RNA polymerase III system
   RNA polymerase III
     120659917
  RNA polymerase I system
   RNA polymerase I
     120659917
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120659917
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_Ribbon_YjdM DUF7577 Zn_ribbon_13 DUF5816 DUF7129 HypA Prok-RING_1 Cas12f1-like_TNB
Other DBs
NCBI-GeneID: 120659917
NCBI-ProteinID: XP_039794120
LinkDB
Position
2N:complement(18439901..18442708)
AA seq 52 aa
MDPQQPEPVSYLCGDCGAENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggatccgcagcagccggagcccgtcagctacctctgcggagattgcggagctgagaac
accctgaagccaggagatgtcatccagtgccgtgaatgtggctaccgcatcctctacaag
aagcggacccgccgcattgtccaatatgaagcgcgctga

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