Panicum virgatum (switchgrass): 120659979
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Entry
120659979 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG1-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120659979
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120659979
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120659979
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
DUF4971
Motif
Other DBs
NCBI-GeneID:
120659979
NCBI-ProteinID:
XP_039794221
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Position
2N:complement(20209454..20213360)
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AA seq
311 aa
AA seq
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MIFSALVLLFCFTWSIRFKTAAAAGHGSAGTDQNYGTLDQVKEKLQQVGLESSNLIIGVD
FTKSNEWTGKHCFDGRSLHHLGDAPNPYEQAIGIIGRTLSAYDEDNRIPCFGFGDTSTHD
RSVFNFYRDGRACNGVSEALQRYREIAPHIRLSGPTSLAPIIETATRIVEASRHQYHILL
IIADGQVPTRTRAHSASYPTEARSMNYLEERTLQALIRASHFPLSIVLVGVGDVPWDDRI
HRHDNRRLFDNFQFVDFTEIMSRETSQTEKEDQFALEALRKIPAQYSAIIDKWIREQAAS
APSGTPLLPPC
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatcttctctgctttagttctactgttctgcttcacctggtccattcgtttcaagaca
gccgccgctgcaggccatggatcagcaggaacagaccagaactatggcaccttggatcag
gtgaaggagaagctccaacaggtcgggctcgagtcatctaaccttataatcggggtggat
ttcaccaagagcaacgaatggacagggaagcattgtttcgacgggagaagcctgcatcac
ctcggcgacgctccgaacccttacgagcaggcgatcggcatcatcgggagaacgctgtca
gcgtacgacgaagacaacaggatcccatgcttcggcttcggggacacatcaacgcacgat
cgaagcgtcttcaacttctacagagatggccgggcgtgcaacggagtttcagaagcactg
cagcgatacagagagatcgcccctcacattcggctctctgggccgacatctctagctccg
atcatagaaacggcgacgagaattgttgaagcttctaggcaccagtaccacatcctactg
atcatagctgacggccaggttccgacacgtactcgtgctcattcagcaagctacccgact
gaggcaagatccatgaactaccttgaagaaaggactcttcaagctctcatacgtgccagt
catttccctctgtctattgtcctcgtcggggttggtgatgtgccatgggatgatcgcatt
caccgccacgataaccgacgtttgtttgataatttccagtttgtggatttcaccgagata
atgtcgagggaaacgtcgcaaaccgagaaggaggatcagtttgcgctggaagctctgagg
aagataccagcccagtacagcgcgataatcgacaagtggatccgggagcaggccgcaagc
gcgccttcggggactcctcttctcccaccttgctga
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integrated database retrieval system
