Panicum virgatum (switchgrass): 120660080
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Entry
120660080 CDS
T07260
Name
(RefSeq) DNA repair protein RAD51 homolog 4-like isoform X1
KO
K10871
RAD51-like protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120660080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120660080
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
120660080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
ATPase
DnaB_C
AAA_25
ATPase_2
nSTAND3
divDNAB
Motif
Other DBs
NCBI-GeneID:
120660080
NCBI-ProteinID:
XP_039794356
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All DBs
Position
2N:complement(23178891..23188171)
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AA seq
303 aa
AA seq
DB search
MSATRGRSGEGATTSGCGLKRRNAPQDHEDSEMMNQDQLSTEDWCGRFWNGMELLKDVNE
KKHFLPTGLEGIDTLLGGGLRQGQLTEITGPSSSGKTQVCLHSASNIAAKQMGLVMYLDT
SNSFSPSRIATIIYGISDLFGQRGFELQTKDARLKSVMKSIICESVFDIFALFEVLHQLE
VSLLNCKVNNGGSKVCLLIIDSISSLLAPIIGGKYPQGRSMMISVAMILKKLADEHNLSV
LVTNHMVSAGNGAVKPALGESWKAVPHVRLMISRECENNICTATVLKHTLLASGRTAKFV
APS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgactcgtggcagaagcggagaaggagccaccacatccggctgcggcctcaag
cgccgcaacgcaccacaagatcacgaggatagtgagatgatgaatcaagatcagctttcc
accgaagattggtgtgggcgattttggaatgggatggaattgctcaaggacgtcaacgaa
aaaaagcatttcctccctactggacttgaaggcattgacacacttcttggaggtggtctg
cgccaaggtcagctaacagagattactggaccgtcatcttctggtaaaacacaggtctgt
ctacattctgcttcaaatattgcagccaagcagatggggttggttatgtacttggatact
agtaactccttctctcctagtcgcattgctactataatttatggaatctctgacctattt
ggtcaaagaggttttgaattgcagacaaaggatgcaaggctcaagagtgtcatgaaaagc
atcatctgtgagtctgtgtttgatatatttgctttgtttgaagtactacatcaacttgaa
gtatctctgctaaattgcaaggtaaacaatggtggtagcaaagtttgtttgcttatcatt
gactcaatatcatccttacttgctcccatcattggaggcaagtatccacaagggcggtca
atgatgatatcagtggcaatgattctaaagaagttagcagatgagcataacctgtctgtt
ctggtaaccaatcatatggtttctgctggcaatggagctgttaagcctgctctgggagag
agctggaaagctgttccacatgtccgcctgatgatatcccgtgaatgtgagaataatatc
tgcacagcaactgtgctgaagcacacactactggcttctggccgtactgcaaaatttgtg
gcacccagctga
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