Panicum virgatum (switchgrass): 120660158
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Entry
120660158 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120660158 isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120660158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120660158
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[C] (Qc)
Use1
120660158
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Gene cluster
GFIT
Motif
Pfam:
Use1
RASSF8-10_RA
LMBR1
Syntaxin_2
DUF4682
Motif
Other DBs
NCBI-GeneID:
120660158
NCBI-ProteinID:
XP_039794470
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Position
2N:complement(27053255..27057836)
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AA seq
235 aa
AA seq
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MRISRTQVNLLRLLKSAPRQQNQAKLIHYVMTSRELLEKLAAETTPEGISRISKGKFNEY
SNKIEELAARLAPKVPDGALYEIKEDCPSEVEQVGSPIDLSSELRRRLTSFQVEAGQTVS
EKERDVGAPIRLNAEAQAQIEKLRKLQESFTDDMVEFARQLKETSLLMNQSVQETEKILD
STERVVEHSLAGTGHANVCAAEVYSLTSKTTCFQWLLLFVMTCMFLMVVLLIRIT
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcagcaggactcaagtgaatctgttaaggttactcaaatccgctccacggcag
cagaaccaggctaagctcattcattatgtcatgacatcccgggaactgttagagaagctg
gcagcagaaactacaccagaaggaatatcaaggatttccaaaggaaaatttaatgagtac
tcaaacaagattgaagaacttgctgcaaggcttgctcccaaagtgccagatggtgcgcta
tatgagataaaagaagattgcccatccgaagtggaacaagtaggaagtccaatagattta
tcctcagaattaaggaggagattgaccagttttcaagtagaggctggacaaactgtcagt
gagaaagaaagagatgttggagcacctattagattgaatgcagaagctcaagctcaaatt
gaaaaacttagaaaactgcaagaaagctttactgatgacatggttgaatttgctcgccag
ctgaaggagaccagtcttttaatgaaccaatctgtgcaggagactgagaagatacttgac
tcaacagagagggttgtagagcatagcttggcaggcaccggccatgctaatgtgtgtgca
gctgaggtgtattctttgacctccaagacaacatgtttccaatggcttctgctttttgta
atgacatgcatgtttctcatggtggttctgctcatacggattacatga
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