Panicum virgatum (switchgrass): 120660185 Help Entry 120660185         CDS       T07260                                  Name (RefSeq) protein SMG7-like isoform X1   KO K14409   protein SMG7 Organism pvir  Panicum virgatum (switchgrass) Pathway pvir03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pvir00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     120660185  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pvir03019]     120660185 Messenger RNA biogenesis [BR:pvir03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      120660185    mRNA cycle factors     Common to processing body (P body) and stress granule      120660185 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  EST1_DNA_bind EST1 Motif Other DBs NCBI-GeneID:  120660185 NCBI-ProteinID:  XP_039794524 LinkDB All DBs Position 2N:29397297..29405350 Genome browser AA seq 1040 aa AA seqDB search MMTVPMDSATPAPTSSRDLAERLFNKNNELEDQLRKSVQSKVPSDPNIWLQMRDNFEKII LIDHDFCEQNELEYLLWQLHYKRIEDFRRSISAVNSAASQSGKSNANPDRLKRIKSAFKS FLSEATGFYHDLMLKIKSNCGLPLGYFPEGFENASNSERDDKKTAQLKKGLISCHRCLIY LGDLARYKSLHGDGDSASREYAAASSYYKEAASIYPSSGNPHHQLAILASYSGNEVVAVY RYFRSLAADTPFTTARDNLIILFEKNCQRYGQLSDNNKVPIAKALPPRSSGRGRGRGEVR FQPKDVNAETAARQRECNIPDTLKTFYIRFVRLNGILFTRTSLETFGELFSSVSNDLQIL LSSGLEEELNFGSDAAENALAVVRLTAILIFTVHNVKKEPDSQSYAEIVQRRVLLQSAFT AAFEFVGRILRRCSELHDVASSFYLPAILVYIEWLASHPELAVDTEMEKKHANARSFFWN QCIAFMNKLVLTNLAAIDGDDDEACFSNMSMYEEGETGNRLALWEDLELRGFLPLVPAHV ILDFSSKHTFGNVGSTKEKKARVQRIFAAGKSLLNFVQVDQLRIYFDPSSKKFVMAKKPP VPKVSAPLHESADALKTNAIEMEHEAARRIDSVSGNMGALQSKVQLCPEGDDDEEIVFKP TASEKFPKAPSELSVNGYTHPVPMSAAGWLANASLVSIQSTTSMSAAVNYNSTASVSAAG NYNINQSLPISSISWAVNGEQQVIPNIDPRFELLQPVEVSASSWISNGAQHVGRQNTVST FPDVVSDPRVSASMLPCFSSPDYSKLLSDKEMFLMNGLKNVNITGNGYLEQRLQAGLSGL QSMGYSPQIPVECGGNVTNLIHNQVKITGETISSTLDSVVPSMAPSGGVPLKFTEAPLAA SKNSVSRPSKPVGPPPGFNHVTPKRQDDSVSVEKLQSPQVDDYSWLDGYQPSVDHVDNLR AVYPGVSASSTAFTTPFPFPGKQQISGVHPQGPIERTWQDFHLFEPAKQNMFQNYQQKNQ QSGQMAEQPTNSIWSNNYHV NT seq 3123 nt NT seq  +upstreamnt  +downstreamnt atgatgactgttccgatggatagtgctacccccgccccgacgtcctcccgggaccttgcg gagcgcctcttcaacaagaataacgaactcgaagatcagctccgcaagtctgtgcagtcc aaagtcccatcagatcccaacatatggcttcagatgcgtgacaattttgagaagataatt cttatagatcatgacttctgtgaacagaatgagttagagtatctcctctggcagctgcac tacaaaagaattgaggacttcaggaggagcattagtgctgtaaactcagctgcatctcag agtgggaagagcaatgccaacccagatcgattgaagagaattaaatcagccttcaaaagc ttcctttcagaagcaactggcttctatcatgacttgatgttaaagatcaagtccaactgt ggccttccacttggttactttccagagggctttgagaatgctagcaactctgagagagat gacaagaaaacagctcagttgaagaaaggtttgatttcatgccatcgctgcctaatatat ttaggagatcttgctcgttacaagagcttgcatggtgatggtgactctgctagtcgtgaa tatgctgccgcttctagttactacaaggaggcagcttcgatctatccttccagtggaaac cctcatcatcagcttgctatactagcttcttactcaggcaatgaggtggtagctgtttat aggtacttccgaagcttagctgcagatactccttttaccactgcacgggacaacttgatt attctcttcgagaagaattgtcaaagatatggacagctgtcagataacaataaagttccc attgctaaggcattacccccacggtcatctgggaggggccgaggacggggagaagtaagg tttcaaccaaaagatgttaatgcagaaacagctgcaagacagcgggagtgcaatattcca gatacattgaagaccttctatatacgatttgttaggctcaatgggattcttttcacgagg accagtttggaaacatttggggagctgttttcttcagttagcaatgatttgcagattctt ctttcatctggtcttgaggaggagcttaatttcggttctgatgctgcagaaaatgcatta gctgttgttagactcactgctatccttatattcacagtgcataatgtaaagaaagaaccc gatagccagtcatatgctgaaattgtgcaacgcagagtactgcttcaaagtgcgtttaca gcagcttttgagtttgttggacgaattctcagaaggtgttcagagcttcatgatgttgca tcaagtttctatctgccagccattctggtctacatcgaatggctggcatcccatccagag ttggctgttgatacagagatggagaaaaaacatgcaaatgctagatctttcttctggaac cagtgcattgcatttatgaataagctggtcctcacaaaccttgcagccattgatggtgat gacgatgaggcttgcttttctaatatgagcatgtatgaggaaggtgaaactggcaacagg cttgccctttgggaagatcttgaattaagaggttttttgccattagttcctgcacatgtc attttggatttctctagcaaacacacatttggaaatgttggaagcaccaaggagaagaag gcacgggttcaacggatttttgccgcagggaagtcactgctaaactttgttcaggttgat cagttgaggatatattttgatccatcttcgaagaagtttgtcatggccaagaaacctcct gttcccaaagttagtgcccctctacatgagtctgctgatgcgctcaaaacaaatgccatt gaaatggagcatgaagcggctagaagaattgattcagtttctggtaatatgggtgcactt cagtcgaaagtacagttgtgtccggaaggagacgatgatgaagaaattgttttcaagcct acagcttccgagaagtttccaaaagctccttctgagctgtcagttaatggatacacccat cctgtaccaatgtctgcggctggttggctagccaatgctagtttagtttctattcagagc actacatcaatgtctgctgctgttaattataacagcactgcatctgtatcagctgctggt aattataacattaaccagtcgcttcccatatcttcgatcagctgggctgtcaatggtgag caacaggtgattcctaacattgatccaagatttgaactcctgcagcctgttgaggtgtct gcttccagctggataagcaatggtgcacagcatgtaggtcgtcagaacacagtttcaact tttccagatgttgtctctgacccacgggtatctgcatcaatgcttccatgtttcagtagc cctgattattcgaagttgctcagtgacaaagaaatgttcttaatgaatggattgaagaat gtgaacataactggaaatggttatctggagcagagattgcaggctggattaagtggttta cagtccatggggtattcacctcagattcctgttgaatgtggtggtaacgttacaaattta atacataatcaggtaaaaattactggagagactatctcctctacacttgattcagttgta ccttcaatggcaccatcaggtggtgtaccactgaaattcactgaagcaccactagctgct tcaaagaactctgttagtcgtccatcaaagcctgttggaccacctccaggatttaatcat gttacccctaagcgtcaagatgattctgtttcagttgaaaaattgcagagcccacaggtt gatgattacagctggttggatggctatcagccatcagtggatcatgtcgacaatttaaga gctgtttatcctggtgtgagtgctagcagcactgcattcaccactccatttccctttcct gggaaacagcagatctctggggtacacccacaagggccgattgagaggacatggcaagat ttccacctttttgagcctgcaaaacagaatatgttccaaaattaccagcaaaaaaatcag caaagtggtcaaatggctgaacagccaacaaattctatctggtcaaacaattaccatgtg tga

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