Panicum virgatum (switchgrass): 120660301
Help
Entry
120660301 CDS
T07260
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120660301
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120660301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
120660301
NCBI-ProteinID:
XP_039794704
LinkDB
All DBs
Position
2N:complement(36036711..36045012)
Genome browser
AA seq
890 aa
AA seq
DB search
MAAERQLVVAVEGTAALGPYWSAILGDYVEKIVRSFCANEVPGQKLAGAPPELALVVFHT
HGPYSAFGVQRSGWTKDIDAFLSWLSGIPFSGGGFSEASTCEGLAEALTILHGSPNTTQS
HQNHEAQKHCILVAASNPYPLPTPVYCTPTQSTDHKENTESSKESSMADAEAVAKSFAQC
SVSLSVISPKQLPTLKAIYTAGKINPRAADPSVDHAKNPHFLVLLSENFMEARTALSHPL
HGNLAPNQTVTKMDTTPAVTMAGPTSNGNPSVNGPMMGRRPVGVGGVSTATVKLEPATIP
PMVSAPAFSHVTPISNVASQGISALQTSSPSLISQEANIANDNVQEHKPIIHPVQQPVRP
GGHGSLLNNLSQVRLMNSTSLGGGATSMGLPNIGATPIQVHMSNMISSGMTSTPSVISTM
SGPGQPISTQQMVQSTALGSFGSSTSTVSGNSNIAVSASLPSIQSSMSMGQSVQPVAQGG
LMAGSQLGQGGIAANQNVSGLGPTAISSAPAMMPTPGMAQSTGVNSLGVTNNSAMNMPIG
QHLNAQQPPPKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASETLAADWPETMQIVRLI
AQEHMNNKQYIGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSMSDKVGRLIG
MLFPGDMVVFKPQVSTQQPQMQQQQQLQQQQQIQQQQLQQQQHMHMKPQGLPLQQQQMPL
QQQPAQMQPMQQQQAQMQPMQQQQAQMQPMHQQQAQMQPMQHQQQPQMQHQQQPQMQAMQ
HQQPQQMQQMQHQQQQMQPMQHHQQQQQIPLQQQQQQMQHQQQQMQQIQQQQHQQQQMQQ
MQPQQQQQPQMVGTGMGQQYMQGHNRAVQMMQGKIAPQGPGSMPGGGFLP
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaacggcagctggtggttgccgtcgaggggacggcggcgctggggccctac
tggtccgccattctgggggactacgtcgagaagatcgtgcggagcttttgtgctaatgaa
gtgccagggcagaagcttgcaggggcaccacctgagcttgcattagttgtttttcatacc
catggaccttacagtgcttttggtgtgcagcgaagtggatggacaaaagatatcgatgct
ttcctatcatggttatctggaataccattcagtggtggaggatttagcgaagcttctacg
tgtgaaggtcttgctgaagcactgacgatacttcatggcagtcccaatacaacccagagt
catcaaaaccatgaagcacaaaagcattgcatacttgtcgctgcaagtaatccatatcct
ttgcctacacctgtctactgtactcctactcaaagtactgatcataaagagaacactgag
tcatcaaaagagtcttccatggctgatgctgaggccgttgcaaaatcatttgctcagtgc
tctgtctcattgtcagtgatatctccgaaacagcttccaacactgaaggcaatatacact
gcgggcaagataaatcctcgagctgctgacccatcagttgatcatgcaaaaaacccacac
ttccttgttttgctatctgagaattttatggaggcgcggactgctctaagtcatccttta
catgggaacttggccccaaatcaaactgtaacgaagatggacaccacacctgcagttact
atggcaggaccaacttcaaatggcaacccctcagtgaatggaccaatgatgggccggcga
ccagttggtgttggaggtgtttctactgcaactgttaaattggaaccagcaaccatacca
ccgatggtttctgcacctgctttctcgcatgtaacacctatttcaaatgtggcttcacaa
ggaatatcagcactgcaaacctcatcaccatctcttatttcccaagaagcaaatattgca
aatgataatgtgcaggaacacaaacctataatacaccctgttcaacagccagttcggcct
ggtggtcatggtagcctcctcaacaatctgtcacaggttcgtctgatgaactcaacttct
ttaggaggaggtgctacctcgatgggactgcctaacataggggcaacaccaatacaagtc
cacatgtcaaacatgatatcgagtggcatgacatcaacaccctctgtcatctccactatg
tctggacctggacaacctattagtactcaacaaatggtacagagcacagctcttggttcg
tttggctcaagcacttctactgtatcaggcaattcaaatattgctgtatctgcctctttg
cctagcatccaaagcagcatgagcatgggccaatcagtgcaacctgtggcacaaggaggc
ttgatggctggttcacaattaggacaaggtggaattgctgcaaaccaaaatgtgagtggc
cttgggcctacagctatctcttcagcgccagcaatgatgccaacacctgggatggcccag
tcgacaggagtcaattccctaggtgtcacaaacaattctgccatgaatatgcctattggg
cagcatctcaatgcccaacaaccgccaccaaagtatgttaaaatttgggagggaactttg
tccggtcaaaggcaaggacagcctgtatttatctgtaaactcgaaggttataggagcgga
acagcgtctgaaacacttgcagcggattggccagagactatgcagattgttcgtcttata
gctcaggagcatatgaacaacaaacaatatattggcaaggcagactttctagtattccgg
actttaaatcagcatgggtttcttggacaactacaagagaagaagctgtgtgctgtgata
cagttaccttcgcaaactctactgctgtcaatgtctgacaaagtggggcgccttattggc
atgctcttccctggggacatggtggtgttcaagccacaggtctcaactcagcagccacaa
atgcagcagcagcagcaacttcaacagcaacaacagatacaacagcagcaattgcaacag
caacaacacatgcatatgaagccgcaaggcctcccgcttcagcagcagcaaatgccgctt
cagcagcagccggcgcagatgcaaccaatgcaacagcagcaggcgcagatgcaaccgatg
caacagcagcaggcacagatgcaaccgatgcaccagcagcaggcacagatgcaaccgatg
caacaccagcagcagccgcagatgcaacaccagcagcagccgcagatgcaagccatgcaa
caccagcagccacagcagatgcaacagatgcaacaccagcagcagcagatgcaaccaatg
caacaccaccagcagcagcagcagataccactccagcaacaacagcagcaaatgcaacat
cagcaacaacagatgcagcaaatccaacagcagcagcatcagcaacaacagatgcagcaa
atgcagccccagcagcagcagcagccccagatggtgggcacgggaatgggacagcagtac
atgcaggggcacaatcgggcggtgcagatgatgcaaggaaagatagcgccacaggggccg
ggcagcatgcccgggggaggcttcctaccttga
DBGET
integrated database retrieval system
