Panicum virgatum (switchgrass): 120660344
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Entry
120660344 CDS
T07260
Name
(RefSeq) UDP-glucose 4-epimerase 4-like
KO
K01784
UDP-glucose 4-epimerase [EC:
5.1.3.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00052
Galactose metabolism
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120660344
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120660344
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.2 UDP-glucose 4-epimerase
120660344
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
KR
adh_short
NmrA
3HCDH_N
adh_short_C2
DapB_N
Motif
Other DBs
NCBI-GeneID:
120660344
NCBI-ProteinID:
XP_039794787
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Position
2N:complement(37678123..37691424)
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AA seq
370 aa
AA seq
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MAAAAKEAGPSGCSGRAVLVTGGAGYIGSHAVLQLLTAGFRVVVVDSLANSSEIALRRVR
ALAGEHAKNLLAFHKADIRDKDGLEKVFASARFDAVIHFAGLKAVGESVQKPLLYYDHNV
VGTINLLEIMAAHGCKKLVFSSSAAVYGSPKNSPCTEDFPLIPHNPYGRTKLMAEEICRD
IYHSDPEWSIILLRYFNPVGAHPSGYVGEDPCGTPNNLMPFVQQIAVGRRPSLTIFGNNY
ATKDGTGVRDYIHVVDLAEGHLFALRKLFDSSSNIGCEAYNLGTGKGTSVLEIVNAFEKA
SGKKIPLVMGQRRPGDAEILFSSPAKAERELHWKAKYGIAEMCRDLWNWASKHPYGYAAS
ESPKLNGSSR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgaaggaggcggggccgagcggctgcagcggcagggcggtgctggtc
acgggcggggcgggctacatcggcagccacgccgtgctgcagctcctcaccgcgggattc
cgcgtcgtcgtcgtcgacagcctcgccaactcctccgagatcgcgctgcgccgggtgcgc
gcgctcgcgggggaacacgccaaaaacctgctcgccttccacaaggctgatatccgtgac
aaagatggactggaaaaggttttcgcttcagcaagatttgatgctgttattcattttgct
ggactgaaagctgttggagaaagtgtgcaaaagccattgctctattatgatcataatgtt
gttggtacaataaatcttctggaaattatggcagctcatggatgtaagaagttagtgttc
tcatcgtcagcagcagtttatggatcaccgaagaactcaccgtgcacagaagattttcct
ctcattccacataacccatatggtagaacaaagcttatggctgaggagatatgccgtgat
atctaccattcagatcctgaatggagtatcattttgcttaggtatttcaatccagtcggg
gctcaccccagtggatatgttggtgaagacccttgtggaactcctaacaaccttatgccc
ttcgttcagcaaattgctgttggtaggaggccatcgctaacaatatttggaaataactac
gcaacaaaggatgggacaggggttcgtgattatatacatgtggttgaccttgctgaagga
catcttttcgcattacggaagcttttcgacagctcatctaacataggttgtgaagcatac
aacctcggaactggaaagggaacatcagttttggagatagtcaatgcatttgagaaggct
tctggaaagaaaatccctttggtcatgggtcaacgccgccctggtgatgctgagattctc
ttttcgtcacctgcaaaagcggagagagaactccactggaaagcgaaatatggcatcgca
gaaatgtgcagagacctgtggaactgggctagcaaacacccttacggatacgcagcatcc
gagtccccgaagctgaatggcagttcacgctga
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