Panicum virgatum (switchgrass): 120660366
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Entry
120660366 CDS
T07260
Name
(RefSeq) T-complex protein 1 subunit epsilon
KO
K09497
T-complex protein 1 subunit epsilon
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120660366
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120660366
04147 Exosome [BR:
pvir04147
]
120660366
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP60 / Chaperonin
120660366
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
BBS-CCT complex
120660366
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120660366
Exosomal proteins of colorectal cancer cells
120660366
Exosomal proteins of bladder cancer cells
120660366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120660366
NCBI-ProteinID:
XP_039794809
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All DBs
Position
2K:complement(1069303..1073808)
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AA seq
535 aa
AA seq
DB search
MALAFDEFGRPFIILREQEKKTRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSP
DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAEKLL
ERGIHPIRVAEGYEMASRIAFEHLERISHKFEFSADNIEPLVQTCMTTLSSKIVNRCKRA
LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIVVDKDMSHPQMPKRIE
DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLREQEQKYFDEMVQKCKDVGATLVICQW
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELSPEKLGKAGLVREKSF
GTTKDRMLYIEQCANSRAVTIFIRGGNKMMIEETKRSLHDALCVARNLIRNNSIVYGGGS
AEISCSIAVEAAADRHPGVEQYAIRSFADALDAVPLALAENSGLPPIDTLTAVKAQQVKE
SNPHCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgccttcgacgagttcgggcgccccttcatcatcctccgggagcaggagaag
aagacgcgcctgcgcggcctcgacgcgcagaaggccaacatcgccgccggcaaggccgtc
gcgcggatcctccgcacctcgctcggacccaagggcatggacaagatgctccagtccccc
gacggcgacgtcaccataacaaatgatggggcaaccatcctggagcagatggatgttgac
aaccagattgcaaagctgatggtggagctgtcccgcagtcaagactatgaaatcggggat
ggtaccaccggggttgttgtcatggcaggggctctcctggagcaggctgagaagcttctg
gaacgtggtattcacccaattagggtggctgaaggctatgagatggcgtcaaggatagct
tttgaacacctagagcgcatctcccacaagtttgagttcagtgcagacaatatcgagcca
ctggttcagacctgcatgacaactctatcgtccaagattgttaaccgttgcaagcgggca
ctagcagagattgctgtgaaagcagtccttgcggttgccgatttggagaggaaggatgtt
aacttggatttaattaaagtagagggcaaggttggtggtaagctggaggacactgaactg
atatatggaattgttgttgacaaagatatgagccacccgcaaatgccaaagagaattgag
gatgctaagattgccattctgacatgcccattcgagcccccgaagccgaagacaaagcat
aaggtcgacattgacactgtagagaaattccagacgctgcgtgagcaagagcagaaatac
tttgatgaaatggttcagaagtgcaaggatgttggtgcgaccctggttatttgtcaatgg
ggtttcgatgatgaagccaatcatttgttgatgcacagaaatctgccagctgtcagatgg
gttggtggtgttgaattggaattgattgccattgctacaggaggacgtattgttccgaga
ttccaagagttgagtcctgaaaagcttgggaaggctggattagtccgagagaagtccttc
ggaactacaaaggaccggatgctttacattgagcagtgtgccaattccagagctgtaact
attttcattcgtggtggaaacaaaatgatgattgaggagactaagcgcagtcttcatgat
gctctttgtgtggcaaggaatttgatccgcaataactcaattgtgtatggtggcggttca
gcagagatatcttgctcaattgctgttgaagctgctgcagatcggcaccctggagttgag
cagtatgctatcaggtcatttgctgatgcattagatgctgttccactagccttggctgaa
aatagtggtttgccaccaattgataccttaactgcagtaaaagctcagcaagttaaggag
agcaacccccactgtgggatagactgcaacgacgtgggcaccaacgacatgaaagaacag
aacgtgtttgagacgctgatcggcaagcagcagcagatcttgctcgccacccaggtggtg
aagatgatactcaagattgatgatgtcatctcaccgtccgagtactga
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