KEGG   Panicum virgatum (switchgrass): 120660399
Entry
120660399         CDS       T07260                                 
Name
(RefSeq) signal recognition particle receptor subunit alpha-like
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120660399
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120660399
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   120660399
SSDB
Motif
Pfam: SRP-alpha_N SRP54 SRP54_N AAA_22 nSTAND_NTPase5 AAA_17 MMR_HSR1 AAA_16 MeaB CLP1_P AAA_30 AAA_33 DUF190
Other DBs
NCBI-GeneID: 120660399
NCBI-ProteinID: XP_039794853
LinkDB
Position
2N:complement(39045851..39050460)
AA seq 618 aa
MLEELLIFTRGGLILWSSCRALGAAALKGSPIDALIRSCLLEDRSADASFSQDNYALKWT
FHNDLGLVFVAVYQKILHLLYVDDLLAAVRKDFSQIYDPKRTNYDDFTDIFRQLHLEAQA
RAEDMNKSKQAISSRPLPAVSHKTAPKARGAGTRATTKGGASRKDDSDGESSGKDHHTLA
NGSHENAAPKDSSHTRPAVVKGKENGGPKDNGAFDVTKLQRLRKNDRKNTGADNATKQLT
KPDTKKKGKQDRVWDDKPSNKKLDFTDPADERGDEVTEHVALNQGDSMMDKDENLSSDSE
EEVVEDGPKKKGWFSSMFQSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESV
AASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVHAAKERGKPYVIVFVGV
NGVGKSTNLAKVAYWLLQHNLSVTLAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
VVAREAIQEASRNKSNVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDA
VDQLTKFNQKLANLSAVPTARLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
YTDLKKLNVKSIVKTLLK
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgttggaggagctgctcatcttcacgcggggcggcctcatcctctggtcctcgtgccgg
gcgctcggcgccgccgccctcaagggctcgcccatcgacgccctcatccgatcctgtctc
ctcgaggaccgctccgccgacgccagcttctcccaggacaactacgccctcaagtggacc
ttccacaacgacctcggccttgtctttgtcgccgtctaccagaagattctccatctcctc
tacgtcgatgatctcctcgccgccgtccgcaaggacttctcccagatttatgatcccaag
cgcaccaactatgacgacttcaccgacatattccgccagctccatctcgaggcccaagcg
cgtgccgaggacatgaacaagtccaagcaggccatttcgtcccgtccgctgccagccgtc
tcccacaagactgctcccaaggctcgcggcgctggcacccgtgctacgaccaagggtggc
gcctctaggaaggatgactctgatggggaatcatccggcaaggaccaccacactctggca
aatggtagccacgagaatgctgctcccaaggacagctctcatacccgccctgctgttgtt
aagggcaaggagaacgggggccccaaagacaacggggccttcgatgtaactaaactacag
aggttgcgaaagaatgacaggaaaaacactggtgctgacaacgcaaccaagcagctgacc
aaacctgacacaaagaagaaagggaagcaagacagggtgtgggatgacaaaccttctaac
aagaagttggatttcacagacccagccgatgagagaggggatgaggtgacagaacatgtg
gcactcaaccagggagatagcatgatggataaggatgagaacctcagcagcgacagcgag
gaggaagtggtcgaagatggaccgaagaagaaaggctggttctcctcaatgtttcagagt
attgctggtaacaatgtattggagaagtctgatttgcaacctgctctcaaggctctcaaa
gatagactgatgacaaagaatgtggcagaggaaattgcggagaagctttgtgaatctgtt
gcagctagccttgagggcaagaagctaggatcattcacaagaatatcatctacagtccag
acagctatggaggaggctcttcttcgcattttgaccccaaggcggtctattgacatactg
agggatgtacacgctgccaaggagcgtgggaagccatatgtcattgtttttgttggggtg
aatggagttggcaaatcaaccaatcttgcgaaggttgcttattggcttcttcagcataac
ctcagtgtaacgcttgcagcatgtgacaccttcagatctggtgctgttgagcagctgcgg
actcatgcacgcaggcttcagatacctattttcgagaagggttatgaaaaagatccagca
gttgtagcgagggaagctattcaggaagcaagccgaaacaaatcaaacgttgttcttgtt
gatactgctggacgtatgcaggataatgagccactcatgagggcgctctccaagctcatc
aatcttaacagcccagatttagttttgtttgttggagaagcattggttgggaatgatgct
gtcgatcagctcactaagttcaaccagaaattagcaaacctgtctgctgttcctactgct
agattaattgatggtatcctgctcaccaagtttgacaccattgacgacaaggttggggca
gcgctttccatggtgtatatatctggagctccggtcatgttcgtcggttgtggccagtcc
tacacggacctgaagaagctgaatgtgaaatccatcgttaagaccctcctgaagtga

DBGET integrated database retrieval system