KEGG   Panicum virgatum (switchgrass): 120660400
Entry
120660400         CDS       T07260                                 
Name
(RefSeq) signal recognition particle receptor subunit alpha-like
  KO
K13431  signal recognition particle receptor subunit alpha
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120660400
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120660400
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   120660400
SSDB
Motif
Pfam: SRP54 SRP-alpha_N SRP54_N AAA_22 nSTAND_NTPase5 AAA_17 MMR_HSR1 AAA_16 MeaB AAA_30 AAA_33 CLP1_P DUF190
Other DBs
NCBI-GeneID: 120660400
NCBI-ProteinID: XP_039794856
LinkDB
Position
2N:complement(39070924..39075217)
AA seq 622 aa
MFAAMLEELLIFTRGGLILWSSCRALGAAALKGSPIDALIRSCLLEDRSADASFSQDNYA
LKWTFHNELGLVFVAVYQKILHLLYVDDLLAAVRKDFSQIYDPKCTNYDDFTDIFRQLHL
EAQARAEDMNKSKQAISSRPLPAVSHKTAPKARGAGTRATTKGGASRKDDSDGESSGKDH
HALANGSHENAAPKDSSHTRPAVVKGKENGGPKDNGAFDVTKLQRLRKNDRKNTGADNAT
KQLTKPDTKKKGKQDRVWDDKPSNKKLDFTDPADERGDEVTEHVALNQGDSMMDKDENLS
SDSEEEVVEDGPKKKGWFSSMFQSIAGNSVLEKSDLQPALKALKDRLMTKNVAEEIAEKL
CESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVHAAKERGKPYVIV
FVGVNGVGKSTNLAKVAYWLLQHNLSVTLAACDTFRSGAVEQLRTHARRLQIPIFEKGYE
KDPAVVAREAIQEASRNKSNVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALV
GNDAIDQLTKFNQKLADLSAVPTARLIDGILLAKFDTIDDKVGAALSMVYISGAPVMFVG
CGQSHTDLKKLNVKSIVKTLLK
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgttcgccgccatgttggaggagctgctcatcttcacgcggggcggcctcatcctctgg
tcctcgtgccgggcgctcggcgccgccgccctcaagggctcgcccatcgacgccctcatc
cgatcctgtctcctcgaggaccgctccgccgacgccagcttctcccaggacaactacgcc
ctcaagtggaccttccacaacgagctcggccttgtctttgtcgccgtctaccagaagatt
ctccatctcctctacgttgatgatctcctcgccgccgtccgcaaggacttctcccagatt
tatgatcccaagtgcaccaactatgacgacttcaccgacatattccgccagctccatctc
gaggcccaagcgcgtgccgaggacatgaacaagtccaagcaggccatttcgtcccgtccg
ctgccagccgtctcccacaagactgctcccaaggctcgcggcgctggcacccgtgctacg
accaagggtggcgcctctaggaaggatgactctgatggggaatcatccggcaaggaccac
cacgctctggcaaatggtagccacgagaatgctgctcccaaggacagctctcatacccgc
cctgctgttgttaagggcaaggagaacgggggccccaaagacaacggggccttcgatgta
actaaactacagaggttgcgaaagaatgacaggaaaaacactggtgctgacaacgcaacc
aagcagctgaccaaacctgacacaaagaagaaagggaagcaagacagggtgtgggatgac
aaaccttccaacaagaagttggatttcacagacccagccgatgagagaggggatgaggtg
acagaacatgtggcactcaaccagggagatagcatgatggataaggatgagaacctcagc
agcgacagcgaggaggaagtggtcgaagatggaccgaagaagaaaggctggttctcctca
atgtttcagagtattgctggtaacagtgtattggagaagtctgatttgcaacctgctctc
aaggctctcaaagatagactgatgacaaagaatgtggcagaggaaattgcggagaagctt
tgtgaatctgttgcagctagccttgagggcaagaagctaggatcattcacaagaatatca
tctacagtccagacggctatggaggaggctcttcttcgcattttgaccccaaggcggtct
attgacatactgagggatgtacacgctgccaaggagcgtgggaagccatatgtcattgtt
tttgttggggtgaatggagttggcaaatcaaccaatcttgcgaaggttgcttattggctt
cttcagcataacctcagtgtaacgcttgcagcatgtgacaccttcagatctggtgctgtt
gagcagctgcggactcatgcacgcaggcttcagatacctatttttgagaagggttatgaa
aaagatccagcagttgtagcgagggaagctattcaggaagcaagccgaaacaaatcaaac
gttgttcttgttgatactgctggacgtatgcaggataatgagccactcatgagggcgctc
tccaagctcatcaatcttaacagcccagatttagttttgtttgttggagaagcattggtt
gggaatgatgccatcgatcagctcactaagttcaaccagaaattagcagacctgtctgct
gttcctactgctagattaattgatggtattctgctcgccaagtttgacaccattgacgac
aaggttggggcagcgctttccatggtgtatatatctggagctccggtcatgttcgtcggt
tgtggccagtcccacacggacctgaagaagctgaatgtgaaatccatcgttaagaccctc
ctgaagtga

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