Panicum virgatum (switchgrass): 120660456
Help
Entry
120660456 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA synthase 17-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00062
Fatty acid elongation
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04626
Plant-pathogen interaction
Module
pvir_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
120660456
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120660456
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
120660456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
AAA_lid_At3g28540
Motif
Other DBs
NCBI-GeneID:
120660456
NCBI-ProteinID:
XP_039794932
LinkDB
All DBs
Position
2N:complement(40280913..40282616)
Genome browser
AA seq
462 aa
AA seq
DB search
MQASSTTAAMASLRALPLPVLVPLVVSALAFLVTVLRLVLRRQRPVYLLNYSCHLPDVDR
QVNLEVCEYFGLKCRRYSDDIADFMRLIYSKSGLGQETFAPPFIFSGRFDKTLAFAVQEA
EEGLFAVVGQLLAKADVTPADISVLVVACSMFSPMPSLASMIAHRFKMRPDVKAYSVAGM
GCSAGTVGIDTAARSLRCQRRPGYALVVVTENTSLNWYFGENKHMLVTNCIFRVGTAAAL
VTDVPARRADAKYELVRTLRTHHGADDAAFHAATQMEDERGNLGVALTKDLVRVAGAALR
RHITALGPRVLPVAEMLRYAWRVARARAAGNRKAAAAEVPDFQRAFEHMCIHSGGKAVID
AVARLMGFGPAVVEPARATLHRFGNTSSSLVFYELAYFEAKRRVRAGDRLWMLAFGTGFK
ACSNVWRALRDCGPDADNPWNGCVHRYPMPLPPPSKTHKPAA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatcgtcgaccacggcggccatggcgtcgctgcgcgcgctcccgctcccggtg
ctggtgcccctcgtcgtctcggcgctcgccttcctggtgaccgtcctccggctcgtcctg
cggcggcagcggccggtgtacctgctcaactacagctgccacctcccggacgtggaccgg
caggtgaacctcgaggtgtgcgagtacttcgggctcaagtgccgccgctactccgacgac
atcgccgacttcatgcggctcatctacagcaagtccggcctggggcaggagaccttcgcg
ccgcccttcatcttctcgggccggttcgacaagacgctggcgttcgcggtgcaggaggcc
gaggagggcctcttcgccgtggtcgggcagctcctggccaaggccgacgtgacgcccgcc
gacatcagcgtcctcgtcgtggcgtgctccatgttctccccgatgccgtcgctggcgtcc
atgatcgcgcaccggttcaagatgcggcccgacgtgaaggcgtacagcgtcgccgggatg
ggctgcagcgccggcaccgtgggcatcgacacggcggcgcggtcgctgcggtgccagcgg
cgccccgggtacgcgctggtggtggtgaccgagaacaccagcctcaactggtacttcggc
gagaacaagcacatgctggtgaccaactgcatcttccgcgtgggcaccgcggcggcgctg
gtgacggacgtgccggcgcgccgcgccgacgccaagtacgagctggtgcgcacgctgcgg
acgcaccacggcgccgacgacgcggccttccacgcggcgacgcagatggaggacgagcgg
ggcaacctgggcgtggcgctcaccaaggacctggtccgcgtcgcgggcgccgcgctccgg
cggcacatcacggcgctggggccccgggtgctgccggtggcggagatgctccggtacgcg
tggcgcgtggcgcgcgcccgcgcggcggggaaccgcaaggcggcggcggcggaggtgccc
gacttccagcgcgcgttcgagcacatgtgcatccactcgggcgggaaggcggtgatcgac
gcggtggcgcggctgatggggttcgggccggcggtggtggagccggcgagggccacgctg
caccggttcgggaacacgtcgagcagcctcgtgttctacgagctggcctacttcgaggcc
aagcgccgggtccgcgccggcgaccgcctctggatgctggccttcgggacgggcttcaag
gcctgcagcaacgtgtggcgcgcgctccgcgactgcgggcccgacgccgacaacccctgg
aacggatgcgtccaccgctacccgatgccgctgccgccgccgtccaagacgcacaagccc
gccgcctga
DBGET
integrated database retrieval system