Panicum virgatum (switchgrass): 120660464
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Entry
120660464 CDS
T07260
Name
(RefSeq) isochorismate synthase 2, chloroplastic-like
KO
K02552
menaquinone-specific isochorismate synthase [EC:
5.4.4.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00130
Ubiquinone and other terpenoid-quinone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
120660464
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
120660464
Enzymes [BR:
pvir01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
120660464
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Motif
Pfam:
Chorismate_bind
RE_Bpu10I
Motif
Other DBs
NCBI-GeneID:
120660464
NCBI-ProteinID:
XP_039794940
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Position
2N:40477108..40481386
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AA seq
561 aa
AA seq
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MPPPSSSLYSPGRLLPARPASAATVGRWARASCSLSMNGCAPGAGDRGAVCVREARALPA
APAPLDAVGQLRAAVDALGAGAPPAAPSGIIRIEVPIRQRVDAVEWLHAQTALPRCFFSA
RAPLPDTPALAGGNGNGALSGRWKEPVSVAGVGSAVFFRGTEPFSLADWRAIKRFLSKDC
PLIRAYGAIRFDATSDVSVEWEDYGSFYFIVPQVEFNELEESSVLATTIAWDDSLSWTWH
NAVDDLQSLLQKISPCSVEVNTSSLHTTIMSLNHVPTKASWDLAVTKALQMIKEKERELV
KVVLARCSRYITDTCIDPVELLACLKVEGQNAYQFCIQPSDAPAFVGNSPEQLFHRKYLN
ISSEALAGTRARGKTRADDFQIGQDLLLSGKEDIEFTIVRDSIKKKLEMICDEVVVHPSK
ALRKLPRVQHLSAQLAARIRNEDDEFEILNTLHPSPAVCGLPTEEARHFIRDYEIFDRGM
YAGPIGWFGGAESEFAVGIRSALLGKGHSTLVYAGAGIVEGTNPSFEWDELDLKASQFAK
LLRYQEQHICYQEAENMGTVI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgtcttcctcgctctactcccccggccggctcctcccggcccgcccggcg
tccgcggccacggtggggagatgggcgcgcgcgtcgtgctcgctgtccatgaacggctgc
gcgccgggcgccggggaccgcggcgcggtgtgcgtgcgcgaggcgcgggcgctgccggcc
gcgcccgcgccgctggacgccgtgggccagctcagggccgccgtggacgcgctcggggcc
ggcgcgccgcccgccgcgccctccggcatcatccgcatcgaggtgcccatcaggcagcgg
gtggacgccgtcgagtggctgcacgcgcagaccgcactgccgcgctgcttcttctcggcg
cgggcgccgttgcccgacacgcccgccctcgccggcggcaatggcaacggtgccctgagc
ggtcggtggaaggagccggtgagcgtcgcgggcgtgggctcggcggtcttcttccgcggg
accgagcccttctccctcgctgattggcgcgcaatcaagagatttctttcaaaggactgt
ccactgattcgtgcatatggcgccatccgtttcgacgcaacgagcgatgtttcggttgaa
tgggaggactatggctcattttacttcattgttcctcaagttgagttcaatgagcttgag
gagagctcggtccttgcgacgaccatcgcatgggacgattcactatcttggacatggcac
aacgctgtggatgatctccaatcattgttgcagaagatatcaccttgttctgtagaagtg
aacacgtccagcctgcacacaaccatcatgagtctaaatcatgtcccaaccaaggcatct
tgggatcttgcagttactaaagctcttcagatgatcaaagagaaggaaagagagttggta
aaggttgtactggcaaggtgtagcagatacattactgatacttgtatagatcctgtggaa
ctgctagcttgcttgaaggtcgagggccaaaatgcttatcaattctgcatacagccatca
gatgctccagcgtttgttggaaatagtccagagcaactatttcaccggaaatacttgaac
atttccagtgaggcattagctggtactcgagcaaggggaaaaacaagggcagatgacttt
caaatcggtcaggacttgcttctaagtggcaaagaggatattgaatttactatagtgcgg
gacagcataaagaagaagctggagatgatatgtgatgaggtggttgtccatcccagcaag
gctcttcggaaacttccaagagtacagcatttgtcagcacagttagctgcgagaataagg
aacgaagatgacgagtttgagattctaaatactcttcatccaagtccagctgtttgtggt
ttacccactgaagaggcacgccattttatacgagattacgaaatttttgaccgtggaatg
tatgctggtcccattggttggtttggaggagctgaaagcgagtttgctgtcgggattagg
tcagcgttgcttggaaaaggtcacagcactttagtgtacgccggtgcagggatcgttgaa
ggtacaaatccatcttttgaatgggatgaacttgatctcaaagcatctcagtttgcaaag
ttgttgcggtaccaagaacaacatatttgctaccaagaagctgaaaatatgggaacagtg
atatga
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