Panicum virgatum (switchgrass): 120660588
Help
Entry
120660588 CDS
T07260
Name
(RefSeq) protein EDS1L-like
KO
K18875
enhanced disease susceptibility 1 protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120660588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDS1_EP
Lipase_3
Abhydrolase_6
Abhydrolase_3
DUF676
Motif
Other DBs
NCBI-GeneID:
120660588
NCBI-ProteinID:
XP_039795100
LinkDB
All DBs
Position
2N:complement(43296471..43316335)
Genome browser
AA seq
621 aa
AA seq
DB search
MPTDTPAPPQRAASLSDDDRLLVAHCAELSFPPSSPAPAAASARYFQVHHASHPYPCAAF
AFAPSWSAADWAAPSTAEGARQPFGDAEVDAALFPSLRAVGSGVPARANAAFLAAFRGLL
DGSPLQSEVSRAVAEEKRIVFTGHSSGGSIATLAAIWFLEKCTRQGSVNQAHPFCVTFGA
PLIGDNIFNHAVRREGWSQCILHFLRPLDIVPRIPLTPLASFREEIQAVLEWLSPQTPNN
SPAGRSLVIPEYYETLLRSTLSIASYEACSFMGCTSSILGTLTSFIDLSPYRPCGTYYFF
TSSEQLIVLTNSDAVLQLLFYCLQLDPQQQLLDAAARSLSAHWQYEPIKQCMPDIVCVDY
LGAISSTAPGRQTDRAAIGNIELSKEALLHLSAAAQWEKQRQRNQTKIDQSCQKIQEALR
SLNDYKRTCELRGVSYYDSFKLQREVHDFNANVRRLELAGLWDEIIEMLRRRELPDGFEA
REEWVRLGTLFRRLVEPLDIANYYRHSKNEDTGSYLSKGRPRRYKYTQKWHEQLQRAPVG
SSLESCFWAVVEELQAEMVDGMAFEDLRDRVVKLESDAHGWYSSGSLGKDVFLGSSSFVA
WWRTLPEQHKSASCIAKLVSL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggacaccccggcgccgccgcagcgcgcggcgtcgctgtccgacgacgaccgc
ctgctcgtcgcgcactgcgccgagctctccttccctccctcctcccccgccccggccgcc
gcctccgcccgctacttccaggtgcaccacgcgtcccacccctacccctgcgccgccttc
gccttcgcgccctcctggtccgccgccgactgggccgcgccctccaccgcggagggcgcc
cgccagccgttcggggacgcggaggtggacgcggcgctgttcccgtcgctccgagccgtc
gggagcggcgtccccgcgcgcgccaacgccgccttcctcgccgccttccgcggcctgctc
gacggatcgccgctccagtccgaggtatccagagctgtggctgaagagaaacgtatagta
ttcacaggccattcatcaggaggttcaatagccacccttgctgctatatggtttcttgag
aagtgcaccagacagggaagtgttaatcaagcacacccattctgcgtgacctttggggct
cctcttattggagacaatatcttcaaccatgctgttagaagagagggctggtcacaatgt
attttgcatttcctacgtccactagacattgtcccacgtataccattgactccacttgca
tccttcagagaagaaattcaagctgttctggaatggttgtctcctcagacaccaaacaac
tcacctgctgggaggtctcttgtcatacctgagtactatgaaactttactcagaagcaca
ctatctattgccagctatgaggcctgttctttcatgggatgcactagctcaatccttgga
acattgacctcctttattgacctctccccttacagaccctgtgggacgtattatttcttc
acaagtagcgaacagctgattgttctcacaaattcagatgctgtactgcagttgttattt
tactgccttcagttggatccccagcagcaattgcttgatgctgctgctagaagtttaagt
gctcactggcagtatgaaccaattaaacagtgcatgccggatatagtttgcgtggactac
ctgggagctatctcatcaaccgctcctgggaggcagacagacagagcggcaattggaaac
attgaactgagcaaggaagctttactgcacctttctgcagctgcgcaatgggagaagcaa
agacagagaaaccaaacgaagattgaccaaagctgccaaaagatccaggaagccctcaga
tccctaaacgactacaaaagaacatgcgaactccgtggcgtaagctactacgattccttc
aagctccaacgggaggtgcatgacttcaacgccaacgtgcggaggctggagctggccggc
ctctgggacgagatcatcgagatgctccggaggcgcgaactgccggatggctttgaggcg
cgcgaggagtgggtgcgcctgggcacactgtttcgccgcctggtcgagccgctggacatc
gccaactactaccggcactccaagaacgaggacaccggctcctacctctccaaggggcgg
ccgcggcggtacaagtacacccagaagtggcacgagcagctgcagcgcgcccccgtcggg
tccagcctcgagtcctgcttctgggcggtggtcgaggagctccaggccgagatggtcgac
ggcatggcgttcgaggacctgagggatagggtggtcaagctcgagagcgacgcgcatgga
tggtatagttctggaagtctgggcaaggacgtctttctggggagctcgtcttttgtggcg
tggtggaggacgctccccgagcagcacaagtcggcgtcctgcatcgccaaacttgtgtcc
ttgtaa
DBGET
integrated database retrieval system
