Panicum virgatum (switchgrass): 120660611
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Entry
120660611 CDS
T07260
Name
(RefSeq) MYB-like transcription factor ODO1 isoform X1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120660611
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120660611
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120660611
NCBI-ProteinID:
XP_039795129
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Position
2N:44062458..44069092
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AA seq
372 aa
AA seq
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MCSPKFRTCSNERNKKKLSSNKRAKASQWHSSPCKASDRDQGAVACPSGSIVVGPKNPAS
AFSGDARVPSPGGVPLVVFFTVVLYKGGKVAMASPARSWALACLVGLKKGPWTAEEDQKL
VSFLLNNGLFCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGMLSEEEEETVIDLHAEL
GNRWSKIASHLPGRTDNEIKNHWNTHIKKLRKMGIDPATHKPLQPAPPPAGSPEEEEIVT
AVTPGHEAFCTDDVPMAHLLDDIVFSGDVAGAQPAPSDGVTTAYSPDQSPSAASSSSYST
SAAASSSGSGSVDGDDWPDLPLMMDWPESMWHLEDVVTGRTPWEFEDPFLTYQTIALFDH
QETWTNSKIELF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctcctaagttcagaacgtgctcaaatgaaaggaataaaaaaaagctcagttca
aataaacgcgcgaaggcttcgcaatggcatagcagcccgtgcaaagcaagcgacagggac
caaggagcagtagcctgtccaagtggcagcatcgtcgtggggcccaaaaatccagcctca
gcgttttccggtgatgcacgcgtacccagtcctggaggagtgcctctcgttgtcttcttc
accgtcgtcctttataaaggggggaaggtggccatggcgtctccagcgagaagctgggct
cttgcttgcctggtggggttgaagaaggggccgtggacggcggaggaggaccagaagctc
gtcagcttcctccttaacaacggcctgttctgctggcgtgccgtgccaaagctcgccgga
ttgctgcgttgtgggaaaagctgccggctgcggtggaccaactacctgcggccggacctg
aagcgcgggatgctatcggaggaggaggaggagacggtgatcgacctgcacgcggagctg
ggcaaccggtggtccaagatcgcgtcacacctgccggggaggacggacaacgagatcaag
aaccactggaacacccacatcaagaagctcaggaagatgggcatcgaccccgccacccac
aagcccctccagcccgctcctcctccagccggctcgccggaggaggaggagatcgtcacg
gccgtcacgccaggacacgaggcgttctgcaccgacgacgtgcccatggcgcacctccta
gacgacatcgtgttttcaggtgacgtggccggcgcccagcccgctcccagcgacggcgtc
accacggcttattcgcctgaccagtctccctccgccgcatcctcgtcgtcctactccacc
tcggcggcagcatcgagcagcggcagcggcagtgtcgacggtgacgactggcctgatttg
ccgctgatgatggactggccggagtcgatgtggcacctggaggacgtggtaacggggcga
acgccatgggagttcgaggaccccttcctgacgtaccagacgatcgcgctgttcgatcat
caggaaacttggaccaacagcaagatcgagctcttctga
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