Panicum virgatum (switchgrass): 120660723
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Entry
120660723 CDS
T07260
Name
(RefSeq) glutamate receptor 2.4-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120660723
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120660723
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GFIT
Motif
Pfam:
ANF_receptor
Peripla_BP_6
Lig_chan
SBP_bac_3
Lig_chan-Glu_bd
BBP2
Motif
Other DBs
NCBI-GeneID:
120660723
NCBI-ProteinID:
XP_039795282
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Position
2N:complement(45948491..45956303)
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AA seq
1025 aa
AA seq
DB search
MLVLCMYIRAPKVVGEVSYRPCKERRKIMVVGGNIIISLLVLLSSWLLFAGHDQPAGLLG
RAQRPDAAAAASSVVHVGALLDLGSVGGRASRASISLALEDFYASQPPGSGATVALHVAD
CKDDEITAASTAIDLLKDFKVQAIIGPKTSMQARFTIGIGNKTNVPILSYSATSPYLSAN
QSKYFVRTALDDASQVPAIASLIQYFNWRQVVLIYEDSDFGRGIVPYLVDALQDADAHIP
YRSIIPSVPTDDQIKVELNKLKTMQARVFVVHMSPNIAARLFVLAHDAEMLAYGYAWIIT
DSVGNMFSTLDENIINSMQGVLGVRPYVPQSDKLLAFPALFLSRYRQQNQAMPDPASPNI
FHLWAYDTAWAIATALRKAGPLTLGLKLPSLQNSNNSNDLSMLGVSQDGPGLIDSIRTTR
FQGISGEFILVDGQRQGSVFEIFNVIGNSYQSIGFWTPNLGITKKLITSSDASDNVGLNI
VIWPGGSAQPPKGWEWPVAGKKMKIAVPVKPAPNPFVNVKKNLATGKFYVTGYCIDIFEA
VVQEMPYAVPYEYVPVVDPNIATNLTISYSEICHQVSLKKYDAMVGDTTIIINRSSYVDF
TLPYTESGVQMVVPLKERWSTSLWVFLKPIEPILWVAFLAVFVFTGFVIWLVEHKENRDF
GGSAGKQLVNIAYFSFQALLAVPKDPKLKKWLSKFALINLVLLVWLLEKLYSASLTSMVT
ARQLQPTVVDLNQLISNGDYIGYQGGSFVKDFLKSRKVEEHKLRNYRTTDQYAEALMKGS
WNGGVAAVFDEIPYLKLFMSKYCRNHSIVGRVYKTGGFGFVFPKGSPLVADVSRAILTVT
EGDKIMDIERKWFGGDLVCNSQANAIESASVVTWSSLRGVFFITIGLWAIVGIIYAALWF
RLRQEEEQVQEAVAELAIEHVHVNGDDSIIWHISRDSHLVIQLRGNPSPSGDGGPEEGAA
RPEAGHDDVEPPPDVQNLGGPEEQVQAVELPLLPADAASGNVAPLRTAINETEAAENSGR
LLLPK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgctttgtatgtatataagggcaccaaaggtcgtcggagaagtatcatatcgt
ccatgcaaggaacgaagaaagatcatggtggttggtgggaacattatcatctccctcctc
gtgttgctgtcctcttggctcctcttcgccggccacgatcagcctgctgggctgctgggg
cgggctcagcggccggacgcggcggcggcggcgtcgagcgtcgtgcatgtcggagcgctg
ctggacctcgggtctgtcggtgggagggcgtcgcgggcgtccatctcgctcgcgctggag
gatttctacgcctcgcagccaccgggctccggcgccacggtggcgctgcacgtcgcggac
tgcaaggacgacgagatcacagccgcttcgacagcaatagacctcctgaaggacttcaag
gtgcaagccatcattgggccaaagacgtcaatgcaggcgaggttcaccattggtatcggc
aataagacgaatgtacccatcttgtcttattcagccactagtccctacttgtcagctaac
cagtccaagtattttgttcgcactgccctggatgatgcctctcaagttcctgcaatagct
tctctgatccaatacttcaactggcgccaagtcgtacttatctatgaggactctgacttt
ggtagaggcattgtaccctatcttgtggatgctctccaagacgctgacgcacacatccca
taccgaagcatcatcccttctgttcctactgatgatcagataaaggtggagcttaacaag
ctaaagactatgcaagcacgagtttttgtcgtgcatatgtcacccaacattgcagcacgc
ctctttgtccttgcccatgatgctgagatgcttgcttatggttatgcttggattataact
gacagtgttggcaacatgtttagcacccttgatgaaaacataatcaattcaatgcagggt
gttcttggtgtgaggccttacgttccacaatcggacaagctcctcgcattccctgctcta
tttctttcacggtacagacaacagaaccaagcaatgcctgacccagcaagtccaaatatt
ttccatctgtgggcatatgacacagcatgggcaatcgcaacggccctaaggaaggctgga
ccccttacattgggcttgaaattgccatcattgcagaacagcaacaactcgaatgatctg
agtatgcttggtgtatcacaagatgggccgggacttattgattccatccggaccaccagg
ttccaaggcatatcaggtgaatttattctagtagatggccagaggcagggatcagtattt
gagatatttaatgtgattggtaattcatatcaaagtattgggttctggacacctaatctt
ggtataaccaagaaactgattacctcttctgatgcaagtgataatgttggactgaacata
gtgatttggcctggtggttcagcacaacctcccaaaggttgggagtggccagtggctgga
aagaagatgaagattgctgtgccagtaaagcctgctcctaacccattcgtgaatgttaag
aagaatttggctactgggaaattctatgtgactggatattgtatagatatctttgaagct
gttgtgcaggagatgccgtacgctgtcccctatgagtatgttcctgttgtggaccctaac
atagccaccaacttgacgatatcgtacagtgagatatgtcaccaggtttccttgaagaaa
tatgacgcgatggttggggacaccacaataatcattaatcgttcctcgtacgtggacttt
acattaccttacactgaatcgggagtgcagatggttgttcccttgaaggagcgctggagc
acgagcttgtgggtttttctgaagcctatcgaaccaatcctatgggtggccttcttggct
gtttttgtgttcacaggttttgtcatatggcttgttgagcacaaggaaaacagagatttt
ggtggcagtgctgggaagcagcttgtcaacattgcttatttcagctttcaagcacttctt
gctgttccaaaagacccaaaactgaagaaatggttatcaaaatttgcactaataaacttg
gtgttgctggtttggttgttggagaaactctatagtgcaagcttgacctccatggtgact
gcacgacaactccaaccaacggttgttgacttgaatcaacttattagtaatggagattat
attggttaccagggtggttcttttgtcaaggatttcctgaagagccgtaaagtggaggag
cacaaacttagaaattacagaactacagatcagtatgctgaggctttgatgaaagggagt
tggaatggtggtgttgcagcagtatttgacgagattccatacctcaagctatttatgtcc
aaatactgtaggaaccacagtattgttggtcgtgtttacaagactggtggatttggcttt
gtcttccccaagggctctccgctcgttgccgatgtgtcaagggccatactgacggtgacg
gaaggagacaagattatggacattgagaggaagtggttcggaggggacttggtctgcaac
agccaggcgaacgccattgagtcagcctctgttgttacctggagcagtttaagaggagtg
ttcttcataaccattggtctatgggcaattgtggggatcatctacgcagcattgtggttc
cgactgaggcaagaagaagagcaagtccaagaagcagtcgctgaacttgctattgagcat
gtccatgtcaacggagacgatagtatcatttggcacatcagcagagatagccatctggtt
attcagttgcgtggtaatccttcaccatctggagatggaggacctgaagagggtgcggca
cggccagaagcaggacatgacgacgtagagccaccaccggatgtccaaaatcttggagga
ccagaggagcaggtgcaggctgtggagctcccattgctccctgctgacgctgcatcagga
aatgttgcgccattgcgcaccgcgatcaacgaaactgaagctgcagaaaacagtggacgg
cttttgctgccgaaatga
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