Panicum virgatum (switchgrass): 120660724
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Entry
120660724 CDS
T07260
Name
(RefSeq) glutamate receptor 2.8-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120660724
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120660724
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
120660724
NCBI-ProteinID:
XP_039795287
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Position
2N:45965675..45973127
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AA seq
979 aa
AA seq
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MAGRARRPPPFRHVVLLLLGLAALIPATSRAQQQPRASVTVGLIIDADSPVGRIARTTIP
MALDDFYAAFPNASARVRVVQHDSGGDVVAAASAALQLMTAQGARAILGPQSSAESAFVA
DLATRAEVPVVSFSATSPSVSASAAPFFARAALSDAAQAGAVAALVTYFGWRRVVPVYQD
DDYGAAFVPFLVDALTAARAEVPYRCALPGGASKDAVAAAMSRLESEQTRAFVVHARPAL
AELVLAAAVEAGMMAQGYAWVITDGLTGLLGSIHPPQGIIGLVPHAPATPRLRDVRRRWA
RKFMREHRDADPAQAEMGCYALWAYDAAWAVASAAERLRPGDLSSPPGLVGGRSGPTDFS
GLGKSTSGEKFLAAITNTTFDGLGGRFELVDGELAVPAFRVVNIMDDAKERSLGFWTPKH
GLHRRLDGGASASNSGLAPVIWPDESLVVPIGWVQPTSGRKLRVAVPGDVDPAYRAIMHL
DVDPATNRTVAGGFVIEVFEAAVRLLPYALPFEYVWVSSMRYDRLVEKVGNGDFDAAVAD
ITITANRSQHVDFTLPFMSSGIAMVVPMRDQRNTRAWAFLKPLRYDLWLVSFVFLIFTGF
VVWAVEHRVNTEFRGPPFYQIGTLLYFGFSTLVFAHRENLKSNLSRFVVVVWVFVVLILQ
SSYTASLTSMLTVPQLEPAIRDYTSLWLGADKVGIMNNSFMRASMTKSGFPPSRLEPYRA
THSFHEALLNGTIGAIVDETPYLRIFLSAYCDNFTKTAQTNKTGGFGFAFPKGSPYVADL
SRAILNLTESDGMSAIERKWFGDAEGCAAQGSQFTSDSLSFASFWGLFLITGATSLLCCA
VHLATFLVVERRWISEVASTPHVPWKDRVWMLLKRFDHKDLSSHTFRAKDGGGPLAGRSA
DDAGASPGAAHIAAGSPLSVSNQTYDTSEWSFGAPSPAPASATGEIELAAGDEVAAEVAA
APNPIVSHDQTGTGHLASN
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggccggccgcgcccggcgccctccccccttccgccacgtcgtcctcctcctcctcggc
ctcgccgcgctcatcccggccacgtcgcgggcgcagcagcagccgcgggcgagtgtcacg
gtgggcctcatcatcgacgccgactcgcccgtcgggaggatcgccagaaccaccatcccg
atggcgctcgacgacttctacgccgccttccccaacgcctccgcgcgggtccgcgtcgtg
cagcacgactccggcggggacgtcgtcgccgccgcgtccgccgcgctgcagctgatgacg
gcccagggcgcgcgcgccatcctgggcccgcagtcgtccgcggagtcggcgttcgtcgcc
gacctcgccacgcgcgccgaggtccccgtcgtgtccttctcggcgaccagcccctcggtg
tccgcttccgcggcgcccttcttcgcgcgcgccgcgctcagcgacgcggcgcaggcgggc
gccgtcgccgcgctcgtcacctacttcggttggcgccgtgtcgtgcccgtctaccaggac
gacgactacggcgccgccttcgtgcctttcctcgtcgacgcgctcacggcggcgcgcgcc
gaggtcccctaccgctgcgcgctgcccggcggggcgtccaaggacgcggtcgccgccgcg
atgtcccgcctcgagtccgagcagacgcgcgccttcgtggtgcacgcgcgcccggcgctc
gcggagctcgtcctcgccgccgccgtggaggccgggatgatggcgcagggctacgcgtgg
gtcatcaccgacgggctcacgggcctcctcggctccatccacccgccgcagggcatcatc
gggctcgtgccgcacgcgccggctacgccgcggctgcgcgacgtccggaggcggtgggcg
cgcaagttcatgcgcgaacaccgggacgccgatccggctcaggccgagatgggctgctac
gcattgtgggcgtacgacgccgcgtgggccgtcgcgtccgccgcagagcgtctacgcccc
ggcgacttatcatcgccgccgggactggtcggcggcaggagcggccccaccgacttctcc
ggactcggcaagtcaacgtccggcgagaagttcctcgcggcaataaccaacacgacattc
gacggcctcggcggaaggttcgagctcgtcgacggcgagcttgctgtgccggccttccgg
gtcgtgaacatcatggacgacgccaaggagcggagcctcgggttctggacgcccaagcac
gggctgcatcgcaggctggacggcggcgcaagcgcgtccaacagcgggcttgcgccggtg
atctggccggatgagtcgctcgtggtgccgatcggctgggtccagccgacgagcggccgg
aagctgcgggtggccgtgccgggggacgtcgaccctgcctaccgggcgatcatgcacctg
gacgtggacccggcgacgaaccggacggtggcgggtgggttcgtgatcgaggtgttcgag
gcggcggtgcggctgctgccatacgcgctgccgttcgagtacgtgtgggtgagctccatg
cgatacgaccgtctagtcgagaaggtcggaaacggggacttcgacgcggcggtggcggac
atcaccatcacggcgaaccggtcgcagcacgtggacttcacgctgccgttcatgtcgtcg
gggatcgccatggtggtgccgatgcgcgaccagcgcaacacccgcgcctgggccttcctc
aagccgctccgctacgacctctggctcgtcagcttcgtcttcctcatcttcaccggcttc
gtcgtctgggccgtggagcaccgcgtgaacacggagttccgcggcccccctttctaccag
atcggcaccctcctctacttcggcttctccaccctcgtatttgcacaccgggagaacctg
aaaagcaacctgtcgcggttcgtggtggtggtgtgggtgttcgtggtgctcatcctgcag
tccagctacacggcgagcctgacgtccatgctgacggtgccacagctggagccggcgatc
agggactacacctcgctgtggctgggcgcggacaaggtcggcatcatgaacaactccttc
atgcgggcgtccatgaccaagtcgggcttcccgccgtcgaggctcgagccctaccgcgcc
acgcacagcttccacgaggcgctgctcaacggcaccatcggcgccatcgtcgacgagacg
ccctacctcaggatcttcctcagcgcctactgcgacaacttcaccaagaccgcccagacc
aacaagaccggcggcttcggcttcgcgttccccaaggggtcgccgtacgtagcggacctg
tcgcgggcgatcctgaacctgacggagagcgacgggatgagcgcgatcgagcgcaagtgg
ttcggcgacgccgagggctgcgccgcgcagggcagccagtttacgtcggacagcctcagc
ttcgccagcttctggggcctgttcctcatcaccggcgccacctcgctcctctgctgcgcc
gtgcacctcgccaccttcctcgtggtcgagcggcgatggatctcggaggtcgcgtcgacg
ccccacgtgccctggaaggacagggtctggatgctcctgaagcgcttcgaccacaaggac
ctctcgtcgcacacgttcagggccaaggacggcggcggcccgttggccggccgcagcgcc
gacgacgcgggcgcctccccgggcgccgcgcacattgcggccgggagcccgctcagcgtg
tcgaaccaaacgtacgacacgagcgagtggtcgttcggtgcgccgagcccggcacctgca
tccgcaacgggtgagatcgagctggctgctggcgatgaggtggcggcggaggtcgccgca
gctcccaatcccatcgtctcccatgatcaaactggcacagggcatctggccagtaactga
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