Panicum virgatum (switchgrass): 120660747
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Entry
120660747 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase AIP2-like
KO
K16274
E3 ubiquitin-protein ligase AIP2 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120660747
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120660747
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120660747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
zf-RING_UBOX
At5g52880_ARM
zf-RING_16
zf-RING-like
RINGv
PHD
Med19
Pesticin_RB
Zn_ribbon_FGT1_1
Motif
Other DBs
NCBI-GeneID:
120660747
NCBI-ProteinID:
XP_039795313
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All DBs
Position
2N:complement(46396906..46399769)
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AA seq
324 aa
AA seq
DB search
MSATAADEAAVEARLQALRQMLGKKQQFEQAVADLAAVVRDRYAGASPALRKSMYSTVCR
VATVLQTRYTAPGFWRAGLNLFVGTEKLVTNPAEKEHLKSCISRAREHLDEKENEDSIPS
NREADTRFLFEGHLTVGQEPPPPAWLVADNLARELSILTESSGGQDGNSNRIESRAEDVT
PAIMNFLESISGNRDLETALEESLQGIIEHPPRAPPASKEVVANLPVLTVTEEVIARLGI
ETECAVCRENLVVDDKMQELPCKHLFHPPCLKPWLDENNSCPICRHELRTDDHVYESRKE
REKEEEEDRRGAANAVRGGEFMYI
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaccgcggcggacgaggcggcggtggaggcgcgcctccaggcgctgcggcag
atgctcgggaagaagcagcagttcgagcaggcagtcgccgacctcgccgccgtggtacgg
gaccgctacgccggcgcctcccccgcactccgcaaatcgatgtattcaacagtttgccgt
gttgcaacggtgcttcagactagatatacagctcctggattctggcgtgctggtctgaac
ctctttgtgggaactgagaagctggtaactaatcctgctgaaaaggagcacttgaagagc
tgcatttcaagggcccgggagcatcttgacgaaaaagaaaatgaggattccataccaagc
aacagagaagcagacaccagatttctttttgaaggacaccttactgtgggacaggagcct
ccacctccagcatggcttgttgccgataacttagcacgggaattgagcatactaactgaa
tcctctgggggtcaagatgggaacagcaataggatagagtctagagccgaggatgtgaca
cctgctataatgaacttcttagaaagcatatcaggaaacagggatctagaaactgccttg
gaagaatcactgcagggaatcattgagcatccacccagggcacccccagcctcaaaggaa
gttgttgccaatttacctgtcctaacagttaccgaggaagtcattgctagattgggcatt
gagacggagtgtgctgtttgtcgtgaaaacttggttgtggatgacaagatgcaggagctg
ccgtgcaagcatcttttccatcctccgtgcctgaagccatggctggacgagaacaactca
tgcccgatctgccgccacgagctgaggacagatgatcatgtgtatgagagcaggaaggag
cgcgaaaaggaagaggaggaagacaggaggggagcggcaaatgctgtcaggggtggagaa
ttcatgtatatctga
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