Panicum virgatum (switchgrass): 120660860
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Entry
120660860 CDS
T07260
Name
(RefSeq) RHOMBOID-like protein 10, chloroplastic
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120660860
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120660860
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S54: Rhomboid family
120660860
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
QcrA_N
Motif
Other DBs
NCBI-GeneID:
120660860
NCBI-ProteinID:
XP_039795441
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Position
2N:48174200..48176954
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AA seq
346 aa
AA seq
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MASWLLLPLPSFPWLPPPPPPGSSSGGRGGGGGGGDGGDWRPNVVAAFASAQVGSALRRR
FAGLLCSPEVRQLEALPKMDDVCFGGSHSFATHSILGLLGNLFPASYVCSFALFNGNGSG
GSGTYISKGKVLSRRPGRIDSKKRFWTNVLLAINVLAYIAQVASQGKLLMWGAKINSLID
RGQFWRLATSSLLHANVTHLAFNCFSLNSIGPMVEMLTGPRRFIAVYFSSALAGSLMSYR
CCESPAVGASGAIFGLVGAYAVYMWRHKSYFGNARESLEHIGRVVILNMGMGLLSRGIDN
WGHLGGLLGGVAVAWFLGPAWQYQHVAKDGRAVFKDRAPVLRLIKG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtggctgctgctccccctcccctccttcccctggcttcctcccccgccgccg
cccggctcctcctctggcggccgcggcggcgggggcggcggcggagacggcggcgactgg
aggccgaacgtcgtcgcggccttcgccagcgcgcaggtcggcagcgccctccgccgccgc
ttcgccggcctcctctgctcaccggaggtgcgacagcttgaagccttgccgaaaatggat
gacgtttgctttggaggatcacactcatttgccacacactcaatccttggcttgttgggg
aatctgttccctgcgtcatatgtttgcagcttcgctctgtttaatgggaacgggtcaggt
gggagtgggacatacatcagcaaagggaaggtgctgtccagacgacctggcagaattgat
tcgaagaagaggttttggactaatgttcttcttgctattaatgtcctggcttatatcgct
caggtagcatcacaaggaaagcttcttatgtggggagcaaagatcaacagtctgattgat
agaggacaattttggcgtttggcaacatcatctctccttcacgcaaatgtcactcacctc
gctttcaattgtttctctttgaactcaattgggccgatggttgaaatgctaaccggccct
agaagatttattgctgtttatttcagttcagcgctggcaggttcactgatgagttaccgc
tgttgtgagtcacctgctgttggtgcgtcaggtgccatttttggattggttggcgcctat
gcagtttatatgtggaggcataaaagttattttgggaatgcaagggaaagtttggagcat
atcgggcgtgtggttatcttgaatatgggtatgggtctcctttcaaggggaattgataac
tggggtcatctggggggcttgcttggaggagttgctgtggcatggttccttggtccagca
tggcaatatcaacatgtggcaaaggatggtagagcagttttcaaagacagggctccagtc
ctccgcctaataaagggctag
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