Panicum virgatum (switchgrass): 120660869
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Entry
120660869 CDS
T07260
Name
(RefSeq) NF-kappa-B-activating protein-like isoform X1
KO
K25931
NF-kappa-B-activating protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120660869
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120660869
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nkap_C
Motif
Other DBs
NCBI-GeneID:
120660869
NCBI-ProteinID:
XP_039795449
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Position
2N:48342321..48349847
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AA seq
500 aa
AA seq
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MSRSERRLASAVVRLPGCSRVSASPSPRRRSPSPSPRRDRRRDRCPSPYRDRRRDRSPGP
NRDHRRDDRSPSPYRDRRRQWSPYHNDRGRDRDRVPPVRGGGGGGAWSASDDDNDPELQG
LTYFEYRHIKRQKLRKSKKRCIWNITPSPPRAEGDEENYGYSDVEEEKKESPKKKDSPEA
SEEDSKNASGSESGESDSLSESSESECSRRKRKGRKSSRRSSKRSRRRHRHRSYNSESDV
ESESNDDSEGSFDSEDSRDRSKKRSRRHTKSRRGRSSRRKKKSHDTASEQSSEEAEHSDH
SARDSNKKSKSSKRKRSKRSDSEESLPSDANPDVKEDEEIKEPVIDPEAIKFKEMLEAQK
KAALENDMPVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQ
KFEDLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKAKREHKVMADLQRLV
QRTIGNDVGPSHDPFATTDG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcggagcggcgcctcgcttccgccgtggtgcgcctccccggctgctccagg
gtctccgcctccccatcccctcgccgccgctccccgtccccttccccgcgccgtgaccgc
cgccgcgaccgctgccccagcccgtaccgggaccgccgccgcgaccgctcccccggcccg
aaccgggaccaccgccgcgacgaccgctcccccagcccctaccgcgatcgccgacgccag
tggtcgccgtaccacaacgaccgcggccgggaccgcgaccgggttcccccggtccgcggc
ggcgggggtgggggcgcctggtcggcctccgacgacgacaacgacccggaactccagggc
ctcacctacttcgagtaccgccacatcaagcgccagaagctccgcaagagcaaaaagcgg
tgcatctggaacattacgcccagcccgcctcgtgccgagggcgacgaggagaactacggt
tacagcgacgtggaggaggagaagaaggaatccccaaagaagaaggactcgccggaggcg
agcgaggaggacagcaagaacgcctcggggtcagagtctggtgagtctgatagcctatcc
gaatccagcgaatccgagtgttctaggaggaagcggaaagggagaaagagcagtcgccgt
agtagcaagcggagtcggcgccgccatcgccatcgttcctacaattctgagagtgatgtg
gaaagcgagagcaacgatgattcagagggctcgtttgattctgaggactctagggatagg
agcaagaagagatcgcggaggcacacgaaatctaggaggggtaggagctccaggaggaag
aagaagagccatgatacagcatctgagcaaagctccgaggaggcggagcattctgaccat
agcgccagggacagtaacaaaaagagtaagagctcaaagaggaagaggagcaagcggtca
gactctgaagaatcactaccttctgatgccaatcctgatgttaaggaagatgaagaaata
aaggagccagtcattgatccggaagcaatcaagttcaaggaaatgcttgaggcccaaaag
aaagctgccttggagaacgatatgcctgttgggccaatgcctcttcctcgtgcagaaggg
catattagctatggtggtgcactaaggccaggtgaaggtgatgctattgcacagtatgtt
cagcaaggcaagcgtattccgcgacgtggtgaggtcggtctgtctgcagaggagattcag
aagtttgaggatttggggtatgtgatgagtggaagtagacaccagaggatgaatgctatc
cgtatcaggaaggaaaaccaagtttacagtgctgaggataagagggcgctggctatgttt
aactatgaggagaaagcgaagcgggaacataaggttatggctgacttgcagcgcttggtg
cagagaaccattggcaacgatgtggggccttcacatgatccgtttgctactacagatggc
tga
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