Panicum virgatum (switchgrass): 120660880
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Entry
120660880 CDS
T07260
Name
(RefSeq) alpha-amylase isozyme 3B-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120660880
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
120660880
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Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
120660880
NCBI-ProteinID:
XP_039795467
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Position
2N:48608740..48610584
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AA seq
437 aa
AA seq
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MAKQSAAMCSLLVLLLLGLGSQLVQSQVLFQGFNWESWKKQGGWYNYLRGRVDDIAATGA
THVWLPPPSHSVAPQGYMPGCLYDLDASKYGTHAELKSLIAAFHAKGVQCVADIVINHRC
ADYKDSRGIYCIFEGGTPDSRLDWGPDMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNT
RVQEELSDWLNWLKSDLDFDGWRLDFAKGYSAAVAKVYVDNTAPTFVVAEIWSSLQYDGN
GEPSSNQDRDRQELVNWAQAVGGPAAAFDFTTKGVLQSAVQGELWRLKDGNGKAPGMIGW
LPEKAVTFVDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGTPCIFYDHVFDWNLKQEIST
LSTVRSRNGIHPGSKLDILAADGDLYVAKIDDKVIVKIGSRYDVGNMIPSDFHPVAHGNN
YCVWEKSGLRVPAGRHH
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcaatcggctgccatgtgcagcctccttgtgctcctgttgctcggcttggga
tcccagctggtccaatcccaggtcctcttccaggggttcaactgggagtcgtggaagaag
cagggcgggtggtacaactacctccggggccgggtggatgacatcgccgcgacgggggcc
acgcacgtctggctcccgccgccgtcgcactcggtggcgccgcaggggtacatgcccggc
tgcctctacgacctggacgcgtccaagtacggcacccacgctgagctcaagtcgctcatc
gccgccttccacgccaagggcgtccagtgcgtcgccgacatcgtcatcaaccaccgctgc
gccgactacaaggacagccgcggcatctactgcatcttcgagggcggcacgcccgacagc
cgcctcgactggggtccggacatgatctgcagcgacgacacccagtactccaacggccgc
ggccaccgcgacaccggggcggacttcggcgctgcgcctgacatcgatcacctcaacacg
cgtgtccaggaggagctctccgactggctcaactggctcaagtccgacctcgacttcgac
ggctggcgcctcgacttcgccaaaggctactccgctgccgtagccaaggtgtacgttgac
aacaccgcgcccaccttcgtcgtcgccgagatatggagttcgctgcagtacgacggcaat
ggcgaaccatccagcaaccaggacagagaccggcaggagctggtcaactgggcgcaggcc
gtgggcggccctgccgcggcgttcgacttcaccaccaagggggtgctgcagtcggccgtc
cagggcgagctgtggcggctcaaggatggcaacggcaaagcccccggcatgatcggttgg
ctgccggagaaagcggtcaccttcgtcgacaaccacgacaccggctccacccagaactca
tggcctttcccctccgacaaggtcatgcaaggctacgcctacatcctcacgcacccagga
actccctgcatcttctacgaccacgttttcgattggaacctgaagcaagagatcagcact
ctttctacagtgaggtcaagaaacgggatccaccccgggagcaagctggacatccttgcc
gctgatggggatctctacgtcgccaagatcgacgacaaggttatcgtgaagatcggatcg
cggtacgatgtcgggaacatgatcccctcagacttccatcccgttgcccatggcaacaac
tactgcgtttgggagaagtctggtttgagggttccggccgggcgacaccactag
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