Panicum virgatum (switchgrass): 120660933
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Entry
120660933 CDS
T07260
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 17-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120660933
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120660933
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120660933
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120660933
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120660933
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
120660933
NCBI-ProteinID:
XP_039795530
LinkDB
All DBs
Position
2N:complement(49233817..49244217)
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AA seq
889 aa
AA seq
DB search
MEVSAAVALVVAVALMALGMAASAWLQRAEARREEVRRLAWQAAEEVEIAEREEAYGYGQ
YGGVFVRASDVPEAPTLWAAPEAAPAPSEAEDEVAVAAAAAAAAAAAAASPPAGKGVCAM
CARPTTLRCKRCKRVKYCTFKCQIDHWRKGHRDECHPPGLGATQDGTPENVVARVELKDM
PSDKPSNEAEASAEYSQVTGKAESVDCSRLTTTSKACKVHDTAVHEKYSLTTHDQHTELK
SELEQSNKQALGTVNHESSKNLPCMSAVDKVSSTQSSADDLSCNPSKGGGNSPGLCARPD
STGVVPNSPSIDKKYARQQTAQKVARHYPTESALFPYKDFVELYNFEKLELHPFGLCNLG
NSCYANVVLQCLAFTQPLTAYLLEGYHSRNCSKKEWCFMCELEKVLAEGKRGNAPVSPTG
ILSHLNEIGTSFGQGREEDAHEFLRFAIDTMQSASMKEAKKNGVYKLAEESTLVQLTFGG
YLQSKIICTKCQVSSEQSERILDLTVEIDGDVNTLEGALRRFTSSEVLDGDNRYHCSRCM
SYERAKKKLTISEAPNILTIALKRYQSGIFGKISKDVKFPEHLNLSQFMCKTDDYSPVYS
LYAVVVHHDVMNTTISGHYVCYVKDPQGKWHEMDDSKVKPVSLKKVLSKCAYMLLYARCS
PRVPESVRKAMLRQGASHAKKPKEMADSGSTPLGGSYVSMHQGGELCKDHTVHNHTHTLE
ASDAWSYQVPGFSRSDSSSLFSNSDAGSSSTLSSNSTNSTRNLASMEYDHMQPVSSSVIP
EEDDLSYLRQRSSCNPSSSGHDMDKAGEFVQQYHHRLQVGRGVLEDGGENPSFYTDQGKQ
QGSSSRNRGFSRNCKLTEQRRYTGLAFFLEDLLGRGLSRHFTGKGGLGL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtcggcggcggtggcgctggtggtcgccgtcgcgctcatggcgctcggcatg
gcggcgagcgcgtggctgcagcgcgcggaggcgcggcgggaggaggtgcgccgcctcgcg
tggcaggcggcggaggaggtcgagatcgccgagagggaggaggcctacggctacggccag
tacggcggcgtgttcgtgcgcgcctcggacgtccccgaggcgcccacgctgtgggcggcg
ccggaggcggcccccgcaccgagcgaggcggaggatgaggtggcggtggctgctgctgct
gctgcggctgcggcggcggcggcggcctcccctccggcggggaagggcgtctgcgcgatg
tgcgccaggccgacgacgttgcggtgcaagcgatgcaagagggtcaagtactgcaccttc
aaatgccaaatagatcactggagaaaaggacacagagatgaatgccatccaccaggtctt
ggtgccacacaagatggtacaccagagaatgtggtggctcgagtagagctcaaggatatg
ccctctgataagccgtcgaatgaagcagaggcctctgcggagtattctcaggttactggg
aaggcagaatctgttgattgctcaaggcttacaactacaagtaaagcttgcaaagttcat
gacactgctgttcatgaaaaatattctctaactactcatgaccagcatactgagttgaag
agtgaattggagcaatccaacaagcaagctcttggaacagttaaccatgaaagctctaaa
aatttgccatgcatgtcagctgttgacaaagtttcttccactcaaagtagtgcagatgat
ttatcatgcaacccatctaaagggggaggtaactcgcctggtctatgtgcaaggccagat
agtacaggagtggtgccaaatagtccatcaatagataagaaatatgccagacaacaaaca
gctcagaaagttgcgaggcattatccaacagaatcggcactttttccatacaaagacttc
gttgaactctacaacttcgagaagttggaactgcatccttttggtctatgcaaccttggc
aatagctgctatgcaaatgttgttcttcagtgtttggcatttacccaaccacttacagcc
tatcttttggaaggatatcattcacgaaattgttccaaaaaggaatggtgcttcatgtgt
gagctagaaaaggtcctggcagagggcaagcgtggaaatgctccagtatcacctactgga
atactatctcatctgaatgagattgggactagctttggccagggtagagaagaagatgct
cacgaatttctaaggtttgcaattgatactatgcaatctgctagcatgaaggaagcaaag
aaaaatggtgtctataagctagctgaagaatcaactttggtgcagttaacattcgggggc
tatctacaatctaagataatatgcacaaagtgtcaggtcagttcagaacagtctgaacgt
attttggatttaactgttgaaatagatggggatgtcaatacccttgaaggtgcacttcgt
cggttcacatcttcggaggttttagatggtgataatagatatcattgtagcagatgcatg
tcttatgagcgtgccaaaaagaagttgacaatatcagaggcgccaaatattcttacaatc
gcactgaaaagatatcagtctggtatttttggtaagatcagcaaggatgtcaagttccca
gagcacttgaatttgtctcaattcatgtgcaaaacagatgattatagccctgtgtacagc
ttgtatgctgtggttgtccatcatgatgttatgaatacaaccatctctggtcattatgta
tgttatgtgaaggatcctcaggggaagtggcacgagatggacgatagcaaggtgaaacct
gtttctctcaaaaaggtcctgtcaaaatgtgcatacatgctgctttatgcaaggtgttca
ccgcgtgtcccagagtctgtaaggaaagcaatgcttagacaaggtgcatcgcatgctaag
aagcccaaggagatggcagattcaggatccactcctttgggtggcagttacgtgagcatg
caccaaggtggagagttgtgcaaggatcatacagtgcacaaccacacacacacattggaa
gcatccgacgcatggtcataccaggtaccaggctttagtcgaagtgacagctcctcattg
ttcagcaactctgatgcagggtcaagcagcactctcagcagcaatagcactaacagcacc
aggaacttggctagcatggagtatgaccatatgcagccagtgagctcatcggtaatacct
gaggaagacgacctgagctacttgaggcaaaggtctagctgcaaccctagctcctcaggt
catgacatggataaggcaggtgagtttgtgcaacagtaccatcacaggcttcaggttggc
agaggggttttggaagatggtggggagaacccatccttctacactgaccaaggtaaacaa
cagggcagtagtagtcgaaatcgtggttttagtagaaactgtaagttaacagaacagcgt
aggtatacagggttggcctttttcttagaagatctgctagggagaggattgtccaggcat
tttactggcaaggggggcttgggtttgtag
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