Panicum virgatum (switchgrass): 120660949
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Entry
120660949 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 27-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120660949
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120660949
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120660949
NCBI-ProteinID:
XP_039795543
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Position
2N:49636735..49653149
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AA seq
479 aa
AA seq
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MEGQSAAPLLPRIPPPEKRGGGRRLAEEVWEESKKLGEVVGPAVFINLVFSSMNIVSQSF
AGHLGDLDLAAFAMANTVVDGFNFAMLLGMASALETLCGQAYGAKQHHMLGIYMQRSWLI
LLSFAVLLSPMYVFSGQLLAALGQSAELSREAGSVSLRFLPSHFMYAVLLPVVTFLQCQR
KNWVTAAAAAAVFAVHVATTWLLVSCLGLGIFGVAMAFNLSWVAFAALLLTYALGGGCPE
TWTGFSTSAFVGLKEFVALSASSGVMVCLENWYYRILVFLTGFMKNAELSVDALSICMSL
TSWEMMIHMGFLAGTGVRVANELGAANGQGAKFATIVSTTTSFLISLFVSLLALIFHDKL
AIIFSSSQAVIDAVDHISVLLALTILLNGIQPVLSGVAIGSGWQGVVAYVNIGSYYLIGV
PLGVLLGWGFNYGVPGIWAGMIGGTMMQTLILAFITLRCDWNEEALKAGNRVRQWSSTK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcagagcgcggcgccgctgctcccgaggatcccgccgccggagaagaggggc
ggaggacggcgcctggcggaggaggtgtgggaggagtccaagaagctgggggaggtcgtc
ggcccggcggtgttcataaacctggtgttctcctccatgaacatcgtcagccagtccttc
gccggccacctcggcgacctcgacctcgccgccttcgccatggccaacaccgtggtcgac
ggcttcaacttcgccatgctgctcggcatggcgagcgccctggagacgctctgcggccag
gcctacggggcgaagcagcaccacatgctgggcatctacatgcagcgctcgtggctcatc
ctcctctccttcgccgtcctcctctccccgatgtacgtcttcagcgggcagctgctcgcc
gcgctgggccagtccgccgagctgtcgcgcgaggcgggctccgtcagcctgcgcttcctg
ccgtcgcacttcatgtacgccgtcctcctgccggtcgttacgttcctgcagtgccagcgc
aagaactgggtcaccgcggccgcggcggcggcggtgttcgccgtgcacgtcgccaccacg
tggctgctggtgagctgcctcgggctcgggatcttcggcgtggccatggcgttcaacctg
tcctgggtggccttcgcggcgctgctgctcacctacgcgctcggcggcgggtgtccggag
acgtggaccgggttctcgacgtcggcgttcgtgggcttgaaggagttcgtcgccttgtcc
gcgtcctcgggtgtcatggtgtgcttggagaattggtactaccggatattggttttcctc
acgggtttcatgaagaacgccgagctatctgtggatgcattgtctatctgtatgagtttg
actagctgggagatgatgatccatatgggatttttagcaggcactggggtgagggtagct
aatgagcttggcgcggccaatggacaaggtgcaaagtttgccacgatcgtgtccacgact
acgtcctttctgatcagcctcttcgttagtttgctcgccctgattttccacgacaaactc
gcgataatcttctcgtcaagccaggccgtgatcgacgcggttgatcacatctccgttctg
ctcgcgctcaccattctcctcaacgggatccaacctgtgctctccggagtagctattgga
tcaggctggcaaggagtggttgcttatgttaacatcggaagttactacttgatcggtgtt
cctcttggtgttctgctaggatggggtttcaactacggggttcctggaatatgggctgga
atgatcggcggcacaatgatgcagactctaatcctggcatttatcacccttcgatgtgat
tggaatgaagaggcgctgaaagctggtaacagagtgcggcaatggagtagcaccaagtga
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