Panicum virgatum (switchgrass): 120660973
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Entry
120660973 CDS
T07260
Name
(RefSeq) RNA cytosine C(5)-methyltransferase NSUN2-like
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120660973
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
120660973
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120660973
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GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
120660973
NCBI-ProteinID:
XP_039795575
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Position
2N:50039287..50051243
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AA seq
861 aa
AA seq
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MGGGRKRGRTQRRHFKQGRENVWKHNPQRPPAGEGGEGREGNPSWQPFATENPAFEEYYK
EQQIIPEEEWDDFMSMLRKPLPSTFRINASCQFFQDICSQLENDFRKSLETEVSDEHEED
AIRPLPWYPGNLAWHLNFSRMQLRRNQALESFHEFLKRENEVGNITRQEAVSMVPPLFLN
VQPDHHILDMCAAPGSKTFQLLEMIHQSTKPALLPSALVVANDVDVQRCNLLIHQTKRMC
TANLIVTNHEAQNFPGCNLAKFCSETCMDEAKLQRLEFDRVLCDVPCSGDGTVRKAPDMW
RKWNAGMGNGLHRLQVEIAMRGMGLLKVGGRMVYSTCSMNPVENEAVVAEILRRCGDSVE
LLDISSELPELVCRPGLSTWKVRDRGSWFGVHEDIPRYRKSVISPSMFPSGKGSQDVEVN
TDVVDADMKDSTDMGEEGEQERNTAIDDSNNGDSAKTEEKTEVDCESGEALTRYKKLNFT
STRTEHSDYPLHRCMRIVPHDQNSGAFFIAVLRKHSPLNEIQVVDGVKSEQSISKDKTGK
LEEDLGSDKVSSEENIVPQQVVDNTNAVDGEQNGDMDSKSSKDKSSEDAKVIVKETEKAQ
AGTRDRRQQNQGRWRGVDPVIFFKDEVTIKSIVSFYGIKDSFPLEGHLVTRNPDTSHVKR
IYYVSKSVQDVLELNIKVGERLKITSLGLKIFERQSSKEGSPCTFRLSSEGLPLLLPYIT
KQILYASAIDFQHLLQYRTIKFPDFVDAKFGEEASALLPGCCVVVLREGHQDIGSIATDP
SAIAIVCWKGKTNLCVMLSPLDGEELLERISLRFGLKFPKLDKEKPNQEVTGSDEQPDCA
TEADDQPESKASDMEIPDAEA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcgggcggaagcgcgggcgcacgcagcgccgccactttaagcagggccgcgag
aacgtctggaagcacaacccccagcgccctcccgccggcgaaggaggcgaggggcgcgag
gggaatccctcgtggcagcccttcgccaccgagaacccggccttcgaggagtactacaag
gagcagcaaattattcctgaggaagagtgggatgatttcatgagtatgctccgaaagcca
ttaccttccacttttaggattaatgcgagctgtcagttttttcaagatatctgctcacaa
ttggaaaacgacttcagaaaatcattagagactgaggtaagtgatgagcatgaagaagat
gctattcggcctttgccttggtaccctggtaatcttgcatggcatttgaacttttcccga
atgcagctgaggagaaaccaggcacttgagagttttcatgaattcttgaagcgagagaat
gaagttggcaacataactaggcaagaggctgtcagtatggtcccaccgttgtttctgaat
gtacaacctgatcatcatattcttgacatgtgtgctgctccaggatctaaaactttccag
ttactagagatgattcaccagtcaacgaagcctgcattgcttcctagtgccctggtggta
gctaatgatgttgatgtgcaaagatgcaatcttcttattcatcagacaaagagaatgtgc
acagccaacctgattgtgacaaatcatgaagcacaaaactttcctggttgtaatcttgcg
aagttctgttcagaaacatgtatggatgaggccaagctgcagaggttagagtttgaccgc
gtgctttgtgatgtgccttgtagcggtgatgggaccgtccgcaaggctcctgatatgtgg
aggaagtggaatgctggtatggggaatggacttcatcgtctgcaagtagaaattgctatg
cgtggtatgggtttgcttaaagtgggcgggaggatggtttattcaacttgttcaatgaac
cctgttgaaaatgaagctgttgttgctgagattctacggagatgtggggactctgttgaa
cttcttgacatttctagtgagctgcctgaattagtctgtcgtcctggacttagcacctgg
aaggtacgagatagaggttcttggtttggtgttcatgaagacattcctcgctacaggaag
agtgtgatatcaccaagcatgtttccctctggtaaaggcagccaagatgttgaggtcaac
actgatgtagttgatgcagacatgaaggattcaacagacatgggagaggagggagaacaa
gaaagaaatacagcaattgatgacagcaataatggtgacagtgcaaaaactgaagagaaa
accgaagttgattgtgagtccggtgaagctctaactagatataaaaagttaaattttact
tccacccgtacagaacattcggattacccgttgcatcgttgcatgaggattgttcctcat
gaccagaacagtggggcatttttcattgcagtgcttcgtaaacactctcctctgaatgag
atccaggtggtagatggggtaaaaagtgagcagagtatctcaaaagacaagactgggaaa
cttgaggaagatttgggatcagataaggtatcatctgaagaaaatattgtgccccagcaa
gtggttgataacacaaatgctgttgatggagaacaaaatggagacatggatagcaaaagt
tcaaaagataagagctctgaggatgctaaggtgattgttaaggagacagaaaaagctcaa
gcaggaacaagagataggaggcagcagaaccaaggcaggtggagaggggttgaccctgtt
atattttttaaagatgaagtgacaatcaaaagtatagtgtctttctatggtatcaaggat
tcatttccacttgaaggtcatctcgtgactaggaatcctgatactagtcatgttaagaga
atatactacgtgtcaaaatctgttcaagatgttttggagctcaacataaaagttggcgag
cggcttaagatcacctcacttggcctaaagatatttgaaagacagtcatcaaaggaaggc
tcaccgtgcacgtttagattgtcatctgagggattgccactcctgcttccgtacatcaca
aaacagattctatatgcttcggcaattgacttccagcatcttttacagtacaggactatt
aagtttcctgattttgtggatgcaaaatttggtgaggaagcttcagctttacttccaggt
tgctgtgttgtagtattacgcgaggggcatcaggatataggatctatagccacagatccc
tctgcaattgccattgtttgctggaagggaaagaccaatttgtgtgtcatgctatctcca
ctggatggggaggagttgcttgagaggatctcgttacgttttgggctcaaattccccaaa
ttggataaagagaaacccaaccaggaggttactggatctgatgagcagcctgattgtgcc
actgaggcagacgatcaacctgaaagcaaagcatctgacatggaaattccagatgctgag
gcttga
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