Panicum virgatum (switchgrass): 120660976
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Entry
120660976 CDS
T07260
Name
(RefSeq) ABC transporter G family member 1-like
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
pvir04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120660976
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120660976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120660976
04147 Exosome [BR:
pvir04147
]
120660976
04090 CD molecules [BR:
pvir04090
]
120660976
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
120660976
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120660976
CD molecules [BR:
pvir04090
]
Proteins
120660976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
AAA_29
Rad17
RsgA_GTPase
AAA_16
AAA_22
SMC_N
AAA_28
AAA_23
RNA_helicase
AAA_18
AAA_25
AAA_33
AAA_17
MMR_HSR1
ATPase_2
Cytidylate_kin
AAA
nSTAND1
NACHT
PDR_CDR
AAA_14
SASP
AAA_5
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
120660976
NCBI-ProteinID:
XP_039795579
LinkDB
All DBs
Position
2N:50066504..50071470
Genome browser
AA seq
725 aa
AA seq
DB search
MASEQQPQHAPAVPRWTPSPPRLQDQGGDDADSELGVSSSMHSTDGLFPFGSGRSFPPPP
FPLPQPSLEISAAGNGNGNGTTDGPVAREKSLRRTDEGVAISWEDLWVSASGGKGGGRVP
ILCGLNGYARPGEVLAIMGPSGCGKSTLLDALAGRLGSNVSQKGEILINGRRQKLAYGTS
AYVTQDDVLMTTLTVREAVHYAAQLQLPGAMPAGAKRERAEETLREMGLEGAADTRIGGW
MHRGISGGQRRRVSICMEILTRPALLFLDEPTSGLDSAASYHVVGRIARLARREGMTVVA
AVHQPSSEVYGLFAGLCLLAYGRTVFFGPAAETSQFFALSGFPCPSLMNPSDHFLRTINK
DFDKDIEEGMNGEKMTTAQAIDTLVNSYKSSAYMDKVTRQIAEIREVGGAMVKKDWQPSF
VTQSLVLTKRSFVNMYRDLGYYWLRFAIYIMLCLCVGTIFYDVGHSYGSIQARGSMLNFV
AAFLTFMAIGGFPSFVEDMKVFGRERLNGHYGVASFTIANTVSAAPYLALISVVPGAMAY
YMVGLQSSFGHFAYFALVLFAAMMVVEGLMMIVASTVPDFLMGIITGAGIQGVMMLNGGF
FRLPNDLPKPFWRYPMYYIAFHKYANQGFYKNEFLGLTFPSNQVAAGGAATISGSEILRD
YWQVQMGYSKWVDLGILCGMVVLYRLLFLAIVKLTEKVKPMIKGFRFRNTAAPSVHVAER
GSGSP
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgagcagcagccgcagcacgcccccgccgtgccgaggtggacgccgagcccg
ccgcgtctgcaggaccaaggcggcgacgacgcggactccgagctcggcgtgtcgtcgtcc
atgcacagcaccgacgggttattccccttcggcagcgggcgctccttcccgccgccgccg
ttcccgctgccgcagccctcgctggagatcagcgcggcggggaacgggaacgggaacggg
acgaccgacggccccgtcgcccgcgagaagtcgctgcgccggaccgacgaaggcgtggcg
atctcctgggaggacctctgggtgtcggcgagcggcggcaagggcggcggccgcgtgccc
atcctctgcggcctcaacgggtacgcgcgccccggcgaggtgctcgccatcatgggcccg
tccggatgcggcaagtccacccttctagacgccctggcaggaaggctaggttcgaacgtg
agccagaagggggagatcctgatcaatggccggagacagaagctagcctacgggacatcg
gcgtatgtgacgcaggacgacgtgctgatgacgacgctgacggtgcgcgaggcggtgcac
tacgcggcgcagctgcagctgcccggcgcgatgccggcgggcgccaagcgggagcgcgcg
gaggagacgctgcgggagatggggctggagggcgcggcggacacgcgcatcggcgggtgg
atgcacaggggcatcagcggcgggcagcgccggcgggtcagcatctgcatggagatcctc
acccgccccgcgctgctcttcctggacgagcccaccagcggcctcgacagcgccgcctcc
taccacgtcgtcggccgcatcgcgcgcctcgcgcgccgcgagggcatgaccgtcgtcgcc
gccgtgcaccagcccagctccgaggtctacgggctcttcgccggcctctgcctcctcgcc
tacggcaggaccgtcttcttcggccccgccgccgagaccagccagttctttgctctgagc
ggattcccctgtccatccctgatgaacccttctgaccacttcctgaggactatcaacaaa
gactttgacaaggacatcgaagaaggcatgaacggtgagaaaatgaccactgctcaggca
atcgacacgctggtgaactcgtacaaatcctccgcctacatggacaaagtgactcggcag
atcgccgaaatacgcgaagttggaggggcaatggtgaagaaggattggcagccaagcttc
gtgacccaatccttggtgctcaccaagaggtccttcgtgaacatgtacagggacctgggc
tactactggctgcgcttcgccatctacatcatgctgtgcctctgcgtcggcaccattttc
tacgacgtcggacacagctacgggtcgattcaggctcgtggctccatgctcaacttcgtg
gccgctttcctcaccttcatggccatcggaggcttcccgtcgttcgtcgaggacatgaag
gtgttcgggcgggagaggctgaacgggcactacggcgtggcgtccttcacgatcgccaac
acggtgtcggcggcgccgtacctggcgctcatctccgtggttccgggcgccatggcctac
tacatggtcggcctccagagtagcttcggccacttcgcctacttcgccctggtgctcttc
gcggcgatgatggtcgtggaggggctcatgatgatcgtggccagcaccgtcccggacttc
ctcatgggcatcatcaccggcgccggcatccagggcgtcatgatgctcaacggcggcttc
ttccgcctccccaacgacctgcccaagccgttctggcgctaccccatgtactacatcgcc
ttccacaagtacgccaaccaggggttctacaagaacgagttcctggggctcacgttcccc
agcaaccaggtggccgccggtggcgccgccaccatctccggcagcgagatcctgagggat
tactggcaagtgcagatggggtacagcaagtgggtcgacctcggcatcctgtgcgggatg
gtcgtgctctacaggctgctcttcttggccatcgtgaagctcaccgagaaggtgaagccc
atgataaaggggttcaggttcaggaacaccgccgcgccgtccgtgcacgtagctgagagg
ggctccggcagcccgtga
DBGET
integrated database retrieval system
