Panicum virgatum (switchgrass): 120660991
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Entry
120660991 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120660991
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120660991
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120660991
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120660991
NCBI-ProteinID:
XP_039795598
LinkDB
All DBs
Position
2N:complement(50263069..50266411)
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AA seq
492 aa
AA seq
DB search
MGGGGKAEKARRSSARVKLWVARASTVLLWTCVVHLAAYRELWAPSVLTRWPGCLTQPHG
VQLRSEAVATADGGQREAVRSMALPPKRIYKNNGYLMVSCNGGLNQMRAAICDMVTIARY
LNVTLIVPELDKASFWADPSDFQDIFDVDYFIASLRDEVRILRQLPPRMKRRAEMGFLHS
MPPISWSDISYYHHQILPLIRKYKVLHLNRTDARLANSGLPMEIQKLRCRVNYNALRFTP
EIENLGRRLVQALRRNGPFVVLHLRYEMDMLAFSGCTHGCSKKEAEELTKMRYAYPWWKE
KVIDSDAKRKDGLCPLTPEETALVLQALGIDCSYQIYIAAGEIYGGQRRMAALTSAYPNV
VRKEILLPSYLSLFQNHSSQMAALDYMVSLESDIFIPTYDGNMAKVVEGHRRYLGFKKTV
LLDRKLIVELVDQYRNGTRSWADFSSAVKASHTSRMGEPSRRQAIPDKPKEEDYFYANPH
ECLHQPDDLSAL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggcgggaaggccgagaaggcacggcggtcgtcggcgcgggtgaagctgtgg
gtggcgcgcgccagcaccgtgctgctctggacgtgcgtcgtccacctcgcggcctaccgg
gagctgtgggcgcccagcgtgctcaccaggtggcccggctgcctcacccagccgcacggc
gtgcaactccggtcggaggcggttgctacggcggacggcggccagagggaggcagtgcgc
tctatggcgcttccgcccaaaagaatctacaaaaacaatggctatctgatggtctcctgc
aacggtgggcttaaccagatgcgagcagctatttgtgatatggtgacaattgcaaggtat
ctgaatgttactcttattgtaccagagctggataaagcttcattttgggctgatcctagt
gatttccaagatatattcgatgtggactatttcatagcatcactgagagacgaggtccga
attctgagacagctgcctccaagaatgaaaagaagagctgaaatgggatttcttcactcc
atgccacccatcagttggtctgacatctcctattaccatcatcagattctacctctgata
aggaagtacaaggttcttcacctgaacaggacagatgctcgccttgcaaatagtggctta
cccatggagattcagaaactaaggtgccgtgtcaattataatgcattgagatttaccccc
gaaatagaaaacctggggaggcgtctggttcaagctctccgtcggaatggaccatttgta
gttcttcacttacggtatgagatggacatgctcgccttctctggatgcacacatggttgc
agcaaaaaggaggctgaagagctcacgaaaatgagatatgcctacccatggtggaaggag
aaagtgattgactctgatgcgaagaggaaagatggcctctgtcctttaacaccagaggaa
actgcattggtattacaggcactcggcatcgattgcagttatcaaatttacattgcggca
ggtgaaatatatggtggacaaagaagaatggctgcccttacctctgcttatcccaatgtg
gttagaaaagagatactactaccttcatatctcagtcttttccagaaccattcttcccag
atggcagcactagattatatggtatccttggagagtgatattttcatccccacttatgac
ggtaacatggcaaaggtcgtagaaggtcatcgcagatacctggggttcaagaagacggta
ctgctagatcggaagctcatcgtggaactcgttgatcagtacagaaacggcacacggagc
tgggctgatttctcctccgctgtcaaggcgtcacataccagccgcatgggcgaaccgtct
aggaggcaggcgattcctgacaaacccaaggaagaggactacttctatgcgaatccgcac
gagtgtctgcaccaacctgacgatctgtcagccttgtga
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