Panicum virgatum (switchgrass): 120661019
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Entry
120661019 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120661019
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120661019
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120661019
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120661019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
120661019
NCBI-ProteinID:
XP_039795637
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Position
2N:50805750..50809654
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AA seq
705 aa
AA seq
DB search
MAVLRGRRRCRGAVLLLLLASVLAPLVLYGGSPVSVAHLPDSTAASGAFDREDAPNLVWP
QIAASGTSLARDLTIERPGEHKNRVLSATDHLQAVEAASRSRASGKSDASVLREEPESRN
VDDEDAPVVEGDGNAGLGQGGVIREVVGSEGSAGRFGEPGDGNDAVVRNGKDVGIKLPHS
FDAEHKDGSDDGGENIISGMHSTGSLNSSSSQTRDATTSRDNQTRVSNSSSARHTTNRRT
GQSTTSPDATVHIIKDQLTRAKTYLGFFASRGNHGFARELRARMRDIQRALGDATSDRQL
PQNVHSKIRAMEQTLVKVKKIHDSCSGAVNRLHTVLHSTEQQLESNKRQANYLAQVAAKS
LPKGLYCLTLRLTNEYYFTNSKNKDFPYVEKLEDPKLYHYALFSDNVLAAAVVVNSTLVH
AKKPEDHVFHIVTDRLNYAAMKMWFLANPLGKAAIQVQNIEEFTWLNSSYSPVLKQLESQ
FMIDYYFKSGHARPDENPKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDTVVQRDLT
ALWLVDLKGKVNGAVETCRETFHRFDKYLNFSNPLIAKNFDPHACGWAYGMNIFDLSEWR
KQNITEVYHTWQKLNENRLLWKLGTLPAGLVTFWNRTFPLDRSWHQLGLGYNPNVNERDI
RRAAVIHYNGNLKPWLEIGLPKYRKYWSTHVDFNQVFLRGCNVNP
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgctgcggggccggcggcggtgccggggcgcggtgctcctcctcctcctcgcg
tcggtgctcgcgccgctcgtgctctacgggggctcccccgtctcggtcgcgcacctcccg
gactccaccgcggcgagcggcgcgttcgatcgggaggacgcgcccaatctggtgtggccg
cagatagctgcgtccgggacgtccctggccagagatttgacgattgagaggcctggggag
cacaaaaaccgtgtgctatctgcaaccgatcatttgcaagcagttgaggcagcgagtagg
agccgcgcgtccggaaagtctgatgcaagtgtgctgagggaggagcccgagtcacggaat
gtggatgacgaagatgccccggttgttgagggggatggtaacgcagggttgggacagggt
ggcgtgataagggaagttgttgggagtgagggaagtgcaggtagatttggtgaaccgggg
gatggcaatgatgctgtagtgcggaatggaaaagatgttgggataaagttgccgcattca
tttgatgcagagcacaaggatgggtcagatgacggaggggagaacatcatttctggaatg
cacagtactggaagcctgaattcatcttctagtcagactagagatgctactacctccagg
gacaatcaaacaagggtgagtaacagtagttctgctcgtcacacaacaaacagacgtact
ggtcaatccacaacatcaccagatgctacagttcacatcatcaaggaccagttgacaaga
gcaaagacatatcttgggttttttgcttctagaggcaatcatggatttgcaagggagctc
cgtgcacggatgagagatatacaacgtgcactaggtgacgcgaccagtgatcggcagcta
cctcagaatgtccacagcaaaattagagcaatggagcagacactggtgaaggtcaagaaa
attcatgatagttgctcaggtgctgtgaacaggcttcacacagtcctccactcaacggag
cagcaactcgaatcaaacaaaagacaggccaactatctagcacaagtagcagcaaaatct
ctacccaagggtctctattgccttacactgaggcttacaaatgagtattatttcaccaac
tcaaagaataaggattttccatatgtggagaagctggaagaccccaaactctaccactat
gccttgttttcagacaatgtattggctgctgcggttgttgttaactcaactcttgttcat
gctaagaaaccagaagatcatgtattccacattgtgacagataggcttaactatgctgca
atgaaaatgtggttcctggctaatccgttgggtaaagctgctattcaggttcagaacatt
gaagagtttacatggctaaattcaagctacagtccagttctgaagcagctggaatcccag
tttatgattgattactacttcaaaagtgggcatgctaggcctgacgaaaatcccaagttt
cggaaccccaaatacttgtcgattctcaaccatctgaggttttatctccctgagatcttc
ccaaagcttaacaaggtgttatttctagatgatgatactgtagtgcagcgggacctaact
gcactttggttggtagatctcaaaggcaaggttaatggtgctgttgagacctgtagagag
acattccataggtttgataagtacctcaacttctcaaatcctcttattgccaaaaatttt
gatccgcacgcatgtggttgggcatatggcatgaacatatttgatttgtctgagtggaga
aagcaaaatatcactgaggtctaccatacctggcagaagctgaatgaaaacaggctattg
tggaagctaggtaccctccctgctggccttgtaacattctggaaccgtactttccctctt
gatcgttcctggcatcagttgggacttgggtacaatccaaatgtcaacgaaagggatatc
aggcgggcagctgtcatccactacaatggaaatctgaaaccctggctcgagattggattg
cccaaataccgcaaatactggtccacacatgtcgatttcaaccaagtgtttctacgaggg
tgcaatgtaaatccctga
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