Panicum virgatum (switchgrass): 120661109
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Entry
120661109 CDS
T07260
Name
(RefSeq) ATP-dependent DNA helicase DDM1-like isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120661109
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120661109
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
120661109
NCBI-ProteinID:
XP_039795749
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All DBs
Position
2K:complement(2762818..2769786)
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AA seq
804 aa
AA seq
DB search
MGTLSLSNANSITTNNWEPSPATEPIKQEGRADDFVDAILSLPVKFEANSSVSLRVVKEE
EEQLLEPVKDEKADDLLGASSSIPIDLEAKNGDASLITEVMKKEEEQLEKARLQAEEEAR
KREEAARLAFDPETRYNKLDELLSKTQLFSEFLLENMDKIADESVETPAEESQVEEKKKG
RGRKRKAKPQYNDKKAKTAVAAMLTRSREDRLAEDCTLSEEERWEKEQANLVPLMTGGKL
KSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGMHGPYLIIAPLSTL
SNWVNEISRFTPSLASIIYHGDKVARAEIRRKFMPKTVGPDFPIVVTSYEMAMSDAKFLA
VHKWKYVVVDEGHRLKNSKCKLLREIKRIPMDNKLLLTGTPLQNNLAELWSLLNFILPDI
FSSHQEFESWFDFSGKGNEEKQEETEEKRRVHVVSKLHAILRPFLLRRMKEDVEQMLPRK
KEIIIYANMTEHQKQIQDHLVEKTFDNYLHEESDIVLKRPGIKSKLHNLVIQLRKNCNHP
DLLESPFESTGLYPPVEKILEQCGKFQLFDRLLNFLLAQKHKVLVFSQWTKVLDIIEYYL
DSKGLEVCRIDGSVKLEERKRQIAEFNDLNSSMNIFLLSTRAGGLGINLASADTCILYDS
DWNPQMDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRIIKRAFAKLKLEHVVIGKGHFEQ
DREKPNALDEAELLALLRDEQADEDKLVQTDISDEDLLKLMNRSDLPGPPGAADATPLIP
LKGPGWEVVVPTKSGGGMLCSLTS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggggacgctttccttgtccaacgctaactccatcaccacaaacaattgggaaccttcc
cctgccactgagccaattaagcaagaggggagagccgatgattttgtggatgcaatcttg
tctctgcctgtcaagttcgaggccaacagcagtgtctcactccgtgtcgttaaggaggag
gaagagcagctattggagcctgtgaaagatgagaaggctgatgatttactcggtgcaagt
tcatctataccaattgacctggaggccaagaacggcgatgcatccctcatcacggaagtg
atgaaaaaggaagaagagcagcttgagaaggccaggcttcaggcagaggaggaagccagg
aaaagggaagaagctgcaagacttgcttttgatcctgagacacggtataacaagttagat
gagcttctatcgaagacgcaactcttttcagagttcctacttgagaacatggataaaatc
gccgatgaaagtgttgaaactccagctgaagagtcacaggtagaagagaagaagaaaggg
cgtggccgaaagaggaaagcaaagccacaatataatgataagaaggctaagacggcagtg
gcagccatgcttacaagatctcgcgaggatcgccttgcggaggattgtactctttcggaa
gaagaaaggtgggaaaaggagcaggccaatcttgtgccattaatgactggtgggaagttg
aagtcataccagataaagggtgtgaagtggcttatatcattgtggcagaatgggttaaat
gggatacttgctgatcaaatgggacttgggaaaacaatacagacaattggatttcttgct
catctgaaagggaagggcatgcatggtccatacttgataatcgctcctttgtccactctc
tcaaactgggtgaatgaaatctcaaggtttactccatctctggctagtatcatttatcat
ggagataaggtggcccgggcagagataagaagaaaatttatgcccaaaactgttggccct
gattttccaatagttgtgacttcatacgagatggccatgtcggatgctaaatttcttgct
gtacataagtggaagtatgttgttgtggatgagggtcatcggttgaaaaattctaagtgt
aaattattgagggagataaagcgcatcccaatggataataagctccttttgactgggaca
cccctgcagaataatctagcagaactgtggtcactattgaacttcattttgcctgatata
ttctcatcacatcaggaatttgagtcatggtttgatttttctgggaaagggaatgaagaa
aaacaagaagaaactgaagagaagagaagggttcatgttgtttcaaagcttcatgccatt
ttgcgtccgttccttctaaggcggatgaaggaggatgtggaacagatgcttccacgaaag
aaagagataatcatttatgccaatatgactgaacatcagaagcagatccaggatcacttg
gttgaaaaaacatttgacaactacttgcatgaggaatcagatattgtattgaagagacct
ggcataaagtcgaagttgcataatctagtaattcaactgaggaagaattgcaaccatcct
gatcttttggaatctccatttgaatcaacaggtttatatccacctgttgaaaagattttg
gaacaatgtggcaaattccaactttttgacaggttgctaaatttcctgctcgcacaaaag
cacaaggttctagtattttcacaatggacaaaagtgttggacattattgagtattaccta
gattcaaaaggccttgaggtttgccgaattgatggtagcgttaaattggaagaaaggaaa
aggcagatagcagaattcaatgacttgaatagcagtatgaatatcttcctcctgagcacg
agggctggtggacttggcatcaaccttgcttctgctgatacctgtatcctctatgacagc
gactggaatcctcagatggatttgcaggctatggatcgatgccaccggattggccaaaca
cgcccggtgcatgtatataggctggctacttcacattctgttgagggacggatcattaag
agagcttttgcgaagttgaagctagagcatgtggtgatcggcaagggacacttcgaacaa
gacagagagaagcctaatgccttagacgaggccgagctgctggcgctgctgagggacgag
caggccgatgaagacaagctggtacagaccgacatcagcgacgaggacctcttgaagctg
atgaaccggagcgacctccccggcccacctggtgctgccgacgcgacgcctctgatccct
ctgaagggccctggctgggaggttgtcgtaccgacaaagagcggcggtggcatgctctgc
tcgctcacgagctga
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