Panicum virgatum (switchgrass): 120661136
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Entry
120661136 CDS
T07260
Name
(RefSeq) centromere/kinetochore protein zw10 homolog
KO
K11578
protein transport protein DSL1/ZW10
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120661136
03036 Chromosome and associated proteins [BR:
pvir03036
]
120661136
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
120661136
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
120661136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZW10_C2
Zw10_middle
ZW10_C
Dsl1_C
Motif
Other DBs
NCBI-GeneID:
120661136
NCBI-ProteinID:
XP_039795791
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All DBs
Position
2N:complement(51965260..51973306)
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AA seq
746 aa
AA seq
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MAADDVRELLLSTTADASDPSTPLSAPDLRLLIDRLRLRSDRLHASALSFAASHREALAS
SLARAASAADSSASLESSLDSALAPLASSPDLSDLRALADRLLAARRELAERQEHLAAAC
TIASLAARLREARAAANPLDTAAAAAELKPLLIDAGRSGSSEDGPVVFGLLRSDWEQLVD
ELQVGLAKNVEECMEFAPEGGKVVVRATPKCCSSRKQSVQLSVALQSLEIIDALDYGMAK
IADSMTKHILVPAISNIHVAVSVEVLQESGPEHSVSVLSIVPSEELKDNKDGSSLYSRII
DVIKFACKFICMENSKWVQSFAKLTWTRISDMVITHFLSKAVPNEASKLIEFQDVVRSTA
EFEKKLRSMMFLLPDRKDGKLTQFVDDVEVHFAVRKRSEILVKARNILVQYDYDNPLESG
DQGDSVVDLLFLPEKCFTSKSVLLLMKLVHGALKDASMSSARVAKEFCFAARDVLLLYKA
IVPVQLEKHLDSISQVAAIVHNDFYHLSQEILGLAFQYRADFPIDLQKQVVFVDLAPIFS
QMADVVLRRQIQLAIDTISEAIDGADGFQNTHQPQHYESAKFSIEQAVFILEKIRIMWES
ILPKSAYRKSMCHVLGSVFSRITRDILLIDDMAAEETLQLQGLIHLALENLSSLFLSLVD
NDDGSTKFLDHDTWIQLDGTVPSLKKFRKLAELLDMSLKSITAAWESGDLVSCGFTSSEV
QNFIKAIFADSPLRKECLGWIIRTPS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgacgacgtgcgcgagctcctcctctccaccaccgccgacgcctcagatccc
tccaccccgctctccgcgcccgacctgcgcctccttatcgaccgcctccgcctccgctcc
gaccgtctgcacgcctccgccctctccttcgctgcctcccaccgcgaggcccttgcctcc
tcgctagcccgcgcggcctccgctgctgactcctccgcctcccttgagtcctccctggac
tccgccctcgcgccgctcgcctcctcgcccgacctctccgacctcagggcactcgccgac
cgcctccttgccgcgcgccgcgagctcgccgagcgccaggagcaccttgccgcggcctgc
acaattgcttcgctcgccgcccgcctccgagaggcccgtgcggcagcgaatccccttgac
actgctgctgctgccgctgagctcaagcccctactgattgatgctgggcgatccggatcc
agtgaagacggtcctgtcgtgtttgggctcctcaggagcgactgggagcagcttgtcgac
gagctgcaagtgggacttgcgaagaatgtggaggagtgcatggagtttgcacctgaggga
gggaaagtggtggtaagggctactccaaaatgctgttccagtcgaaagcaaagtgttcag
ctttctgtggcgctgcagtcattggagatcattgacgccctagactatggaatggcaaag
attgcggactcgatgacgaaacatattctggtcccagcaatcagtaacatacacgttgct
gtttctgtagaagtgcttcaagaaagtggcccagaacactctgtatcagtcttgagcata
gtaccttcagaggagctaaaagacaacaaagatggttcgagtctatactcaagaataatt
gatgtcatcaagtttgcatgcaagttcatttgcatggaaaatagcaagtgggttcagtct
tttgcaaagttaacttggacaagaatttctgacatggttatcacacactttctctccaag
gctgtaccaaatgaggcatccaagctaattgagttccaagatgttgtgcggagtacagct
gaatttgagaaaaaacttaggagcatgatgtttcttttgcctgatagaaaggatggcaag
ttgacccaatttgttgatgatgttgaagttcattttgctgtacggaagagaagtgagatc
ttggtgaaagcaaggaacattcttgtacaatatgattatgataaccctctggaatctggt
gatcaaggtgattctgttgttgatctactttttctgccggagaagtgttttacatctaaa
tcagtacttctattaatgaaattggttcatggagccctcaaggatgcatcgatgtcatcc
gcaagagttgctaaggaattttgctttgctgctagggatgtcttactcctgtataaggct
attgtgccagttcagctagagaagcatcttgatagcataagccaagtggctgctattgtt
cacaatgacttctaccatttatcccaagaaattcttggccttgcatttcagtaccgtgca
gattttcctattgatctacagaaacaggttgtgtttgttgatttagcgccaatcttctcc
cagatggcagatgttgtattgagaagacaaatacaacttgctattgataccataagcgag
gctatagatggtgctgatggttttcagaacacacaccaacctcagcattatgagtcagca
aaatttagtattgagcaggcagtgttcattttggaaaagatacgcatcatgtgggaatca
atactgccaaaatcagcttacaggaaaagtatgtgtcatgtccttggctctgtcttctcc
agaattacaagagatatccttctgatagatgacatggcagcagaagagacattgcagctg
caaggccttatacatttggctctcgaaaatctctcttcgctatttctttctcttgttgat
aacgatgatggcagcacaaaattcttagaccatgacacttggattcaattggatggaact
gtcccatctttgaaaaagtttcgtaagctagcagagttgcttgatatgtcattgaagtcc
atcacagctgcttgggaaagtggagacctggttagctgtggtttcacatcatctgaggtg
caaaatttcatcaaagcaatattcgctgactcgcctcttaggaaggaatgccttggatgg
atcattaggacaccatcttag
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