Panicum virgatum (switchgrass): 120661158
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Entry
120661158 CDS
T07260
Name
(RefSeq) UDP-glucuronate 4-epimerase 6-like
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00053
Ascorbate and aldarate metabolism
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01240
Biosynthesis of cofactors
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
120661158
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120661158
Enzymes [BR:
pvir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
120661158
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-GeneID:
120661158
NCBI-ProteinID:
XP_039795817
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All DBs
Position
2N:complement(52308525..52310480)
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AA seq
486 aa
AA seq
DB search
MPPSGITAVDAAAKGMKLERYASGGALLLRRATSAKLVSASSHLLFRATVLATLALVFLF
TLHYPSLLSRSFHLSAGGDAAHPSSASHRSLLMSSSSSAAASYGGAAWEKEMRRSARPSR
DGGISVLVTGAAGFVGTHCSLALKARGDGVVGLDNFNSYYDPSLKRARQALLASRGVVVL
DADINDGLLLEKLFDVAAFTHVLHLAAQAGVRYAMEAPQTYVASNVAGLVSVFEVAAKHA
DPQPAIVWASSSSVYGLNTDAPFSEDHRTDRPASLYAATKKAGEAIAHTYNHIYGLSITG
LRFFTVYGPWGRPDMAYFFFARSIVAGEPITLFRAADGSDARRDFTYIDDVVKGCLGALD
TAGKSTGSKSGKKSGPAPLRVYNLGNTSPVPVTRMVAILEKLLGKKSNKRIVTMPSNGDV
PFTHANVSHAAHDFGYRPTTSLEAGLRHFVDWFVEYYKLDTKIVKGARSSAAAKPAKKKK
AAAASS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgtcggggatcaccgcggtggacgcggcggccaaggggatgaaactggagcgg
tacgcgagcgggggcgcgctgctgctgcggcgcgccaccagcgccaagctcgtgtcggcg
tcgtcgcacctgctcttccgcgccaccgtgctcgccacgctcgcgctcgtcttcctcttc
acgctgcactacccgtccctcctgtcccgctccttccacctctccgccggcggcgacgcc
gcgcacccctcgtccgcctcgcaccggagcctgctcatgtcctcctcctcctcggcggcg
gcgtcgtacgggggtgccgcgtgggagaaggagatgcggcggagcgccaggccgagccgc
gacggcgggatctccgtgctggtcaccggcgccgccgggttcgtgggcacgcactgctcg
ctcgcgctcaaggcccgcggcgacggcgtcgtcgggctcgacaacttcaactcctactac
gacccgtcgctgaagcgcgcgcggcaggcgctcctggccagccggggcgttgtggtgctc
gacgccgacatcaacgacggcctgctgctggagaagctcttcgacgtggccgcgttcacg
cacgtgctgcacctggcggcgcaggccggcgtgcgctacgcgatggaggcgccgcagacg
tacgtggcctccaacgtggccgggctcgtcagcgtgttcgaggtggcggccaagcacgcc
gacccgcagccggcgatcgtctgggcgtcgtcgtcgtccgtgtacgggctcaacaccgac
gcgcccttctccgaggaccaccgcaccgaccgcccggcgtcgctctacgcggccaccaag
aaggccggcgaggccatcgcgcacacctacaaccacatctacggcctctccatcaccggc
ctccgcttcttcacagtctacggcccgtggggccgccccgacatggcctacttcttcttc
gcccgcagcatcgtcgccggcgagcccatcacgctcttccgcgccgccgacggctccgac
gcgcgccgcgacttcacctacatcgacgacgtcgtcaagggctgcctcggcgcgctcgac
accgccggcaagagcaccggctccaaatccggcaagaagagcgggcccgcgccgctccgc
gtttataacctcggcaacacctcccccgtgcccgttacccggatggtcgccatcctcgag
aagctgctcgggaagaagtccaacaagcgcatcgtcaccatgcccagcaatggcgatgtg
cccttcacccacgccaatgtcagccacgccgcccacgacttcggctaccgccccaccacc
tccctcgaggccggcctccggcacttcgtcgactggttcgtggagtactacaaactcgac
accaagatcgtcaagggcgcccgcagcagcgccgccgccaagcccgcgaagaagaagaag
gccgcggcggcgtcttcgtga
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