Panicum virgatum (switchgrass): 120661200
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Entry
120661200 CDS
T07260
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120661200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120661200
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120661200
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
120661200
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120661200
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120661200
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
Ank_3
BAR
PH
Ank_4
Ank_5
PH_8
ANK_LRRK2
BAR_2
PH_11
PH_20
PH_13
Motif
Other DBs
NCBI-GeneID:
120661200
NCBI-ProteinID:
XP_039795878
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All DBs
Position
2N:complement(52784933..52792543)
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AA seq
840 aa
AA seq
DB search
MFFSRLDDSPMFRKQMQSLEEGAELLRERCLKFHKGCRKYTEGLGEAYDGDIAFASSLET
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDKLLQFVDIDLHEMKD
ARKRFDKATLLYDQAREKYLSLKKGTRTDVATAVEDELHSARSSFEQARFNLVTTLSNIE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLAYAQQSRERSNYEQAALVER
MQEFKRQIDRESRWSPNGMNDSPNGDGIQAIGRSSHKMIEAAMQSASKGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNSRPSSGYSNQRTSMPSEHGSGLLSRWFSSH
YHGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESAMDQMDWIE
KITGVIASLLSSQSPERRLLLSPKGSSHHRTASESSSFSSSTELEHSISEDCMLEKNSGS
GYFEHSARATQHHRTSMMKPDKPIDLLRKVAGNGNCADCGASEPDWASLNLGVLLCIECS
GVHRNMGVHISKVRSLTLDVRVWEPSVINLFQSLGNAFANTVWEEMLPSSSCADHGDVSR
ADRLENTSRGFALSKPKQSDPIAVKEKFIHAKYAEKDFVRKHNMDEIQLAQQMWDNVSSN
NKKGVYSLIVGSNADVNFSYGHTSFNSALTLGKALLLQEQPASPSNGSSRCFDRNLLEKG
SPGDSISPASTSARIDELDDYVEGLSLLHLACRVADLGMVELLLQYGANVNSTDSRGQTP
LHHCIMKGRHVYAKLLLSRGADSQVTDRDGRTALQYAIDSGTIDDEEILVLLEDPSRQIM
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcagcaggctcgatgactcgcccatgttcaggaagcagatgcaatcactagaa
gaaggtgctgaattgctaagagagagatgtttgaagtttcacaaaggttgccgcaaatac
acggaaggactaggggaagcatatgatggagatattgcatttgcaagttcacttgagact
tttggagggggtcataatgatccgatcagtgttgcgtttggagggcctgttatgaccaaa
tttacaattgccttgagagaaattggaacatacaaggaagtattgcgctcccaggttgag
catatgctaaatgacaagctgctccagtttgtggacattgatttacatgaaatgaaggat
gctaggaaacggtttgacaaggctacccttctttatgaccaggctcgtgagaagtattta
tccttgaagaaaggtacaaggactgatgtagcaactgctgtagaggatgagcttcacagt
gctagatcttcatttgagcaagcacgtttcaatctggtgaccacactttcaaatatcgag
gctaagaaaaggtttgaatttttggaggctgttagtgggacaatggatgcacaccttcgt
tatttcaaacaaggatacgaactactacatcagatggaaccatatatcaatcaagttctt
gcttacgcacagcaatcgagagaaaggtctaactatgagcaggctgctcttgttgagaga
atgcaagaattcaaacgacaaattgatcgggaaagtcggtggtcaccaaatggaatgaat
gattcccctaacggtgatggaatacaagcaattggtaggagttctcataagatgattgaa
gcagcgatgcaatcggcttcaaagggcaaggttcagaccattcgacaaggttatctttcc
aagaggtcttcaaatttgagaggtgattggaaaaggaggttctttgtcctcgacagtcga
ggaatgctatactattatcgcaagcagaacagtaggccgtctagtggttattctaaccaa
agaactagcatgccctctgaacatggttctgggttgctcagcagatggttctcatctcat
tatcatggcggcgtgcatgatgagaaatctgttgcacgccatactgtaaacttgctaaca
tcaaccattaaagttgatgcagatcaatcagatctgcggttctgtttcagaataatttct
cccacaaagaactatacattgcaggcagagagtgcaatggatcagatggattggattgaa
aaaattactggcgtcatcgcttctttgctgagctcccagtcccctgaacggcgtcttctg
ctgagtcctaagggaagcagtcatcatcgaactgccagcgaaagcagttctttcagtagc
tctacagaacttgaacattcgataagtgaagattgcatgctggaaaagaactcaggaagt
ggttatttcgagcattctgctagggctacacagcatcaccgaacaagcatgatgaagcct
gataagccaattgacttgcttaggaaagtggcgggcaatggtaactgtgccgattgtggt
gcctcagagcctgactgggcatccctgaaccttggagttcttttatgcatagagtgttct
ggggtacacagaaatatgggtgtgcatatatctaaggtaagatctctgacgcttgatgtc
agggtttgggagccatctgttatcaatctcttccagtcattaggcaacgcgttcgccaat
actgtctgggaggaaatgctaccttcgtcaagctgtgctgaccatggtgatgtttcaagg
gctgatagattagaaaacacatcgcgcggctttgcactcagcaagcctaaacaatctgat
cctattgcagtgaaggagaaatttattcatgccaagtatgctgaaaaggattttgtgcgg
aaacataacatggatgagattcagctagcacaacagatgtgggataatgtaagttcaaac
aacaagaagggggtgtacagtctgattgtggggtcaaatgccgatgtaaatttttcttat
ggacatacatcatttaattcggctttgactctgggaaaagcgctcctcctacaagagcaa
ccggcttcaccatcaaatggaagttctagatgttttgatcgcaatctgctcgagaagggt
tctcctggggactctatttctcctgccagcacaagtgcccgtatagacgaattggatgat
tatgttgaaggattgtctttgctgcatctagcatgccgtgtcgcagacctgggcatggtc
gagctactcctgcagtatggcgccaatgtaaattctacagattcaagagggcaaacacca
cttcatcactgcattatgaaaggcagacatgtgtatgccaagttgctgctttccaggggg
gctgattctcaagtcacggaccgagatggtagaacagctttacagtatgcaattgacagc
ggaaccatagacgatgaagagatcctcgttttgttagaggacccaagtagacaaatcatg
tag
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