Panicum virgatum (switchgrass): 120661234
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Entry
120661234 CDS
T07260
Name
(RefSeq) ATPase family AAA domain-containing protein At1g05910-like isoform X1
KO
K22531
ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120661234
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AAA
Bromodomain
AAA_lid_3
IstB_IS21
nSTAND3
AAA_2
AAA_5
AAA_16
AAA_18
TIP49
AAA_22
AAA_30
RNA_helicase
AAA_14
TTC3_9th
Mg_chelatase
AAA_7
AAA_25
Sigma54_activ_2
NPHP3_N
AAA_33
ABC_tran
PhoH
Parvo_NS1
AAA_28
RuvB_N
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
120661234
NCBI-ProteinID:
XP_039795927
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Position
2N:53135162..53142686
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AA seq
1199 aa
AA seq
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MVAMEGKGDASVTPLRTSDRLRQRPKYYARGYMYYKPAMRKKVKSKKRTAASQIAKKLLR
KPAARPPPADSIAANLRRSTRKRRISVNLEGYDTDSSSMEDDDLMRPRYRSSKSKGENNA
AHDEVSARPKRQKLSNSIPRREGLRPRRSLRGKRLHAYQESEDEQESSDEQGAEDQRENG
NEIEEDAGDDDEVDGGDEAEADGDDEDGEEEQEGRRRYDLRDRSEVRRPSPRKEGKHRPQ
SPRRVLVHGIGPKNSKYLKKGGSRMHKRPRFSLPDDSDDSLLVDEPDEGPSMPWMRSGRG
GMPWLMGGLDMHSPAAWGLNVGASGWGHQGDSSTSLMPGVQTAGPSSKGGADIQPLQVDE
SVSFKDIGGLSEYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIARALA
CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRS
SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFYFPLPGY
EARAEILDIHTRKWKDPPPKELKMELAVSCVGYCGADLKALCTEAAIRAFREKYPQVYTS
DDKFVIDVDSVSVEKYHFLEAMSTITPAAHRGSIVHSRPLSSVIAPCLKRHLDKIMERIS
DIFPFLSSVDFSKFSALSYGSSIPLVYRPRLLICGGESVGLDHVGPAVLHELEKFSVHSL
GLPSLLSDPSAKTPEEALVHIFGEAKRTTPSILYLPQFHLWWDTAHEQLRAVLLTLLNEL
PSNLPVLLLGTSSVAFTDLEEECASIFSSRNMYQVDQPSYDDRLRYFNILFESLLSFQTE
ESRNKLKKQKSAIDLPKAPKVVEGPKVSELKARAEAEQHAVRRMRMCLRDICNRILYNKR
FNVFHFPVSEEEVPDYRSVIHKPMDMATVLQRVDSGQYLTRAAFMNDIDLIVSNAKTYNG
NDYNGSRIVSRACELRDVVQGMLSQMDPSLVSFCDKIASQGGPLQVMDDEDSSILQAAPV
AQLVSGTRISARLRNVQPEVNLSQSYEVLKRQKKSAENEQGLTKDVAARDERSPEDVDLS
KPISPEETPKEPDSNGTLKEADNSPAEAAEVPARPEPMETDSSEVATTVSTGDDLLGQLE
ALKQRFMEHTAGYGVPQLERLYSRIMKGVIELTSKESNEDHRRLVVRYLLTFVENSDNF
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgatggagggaaagggggatgcgtcagtgacgccattgaggaccagtgaccgg
ctccggcagcgcccaaagtactacgctcgtggctatatgtattacaagccagccatgcgg
aagaaggtcaagtctaagaagcgaacagcggcatcacagattgctaagaaactgcttcgc
aagccagctgcccggccaccacctgctgattcaattgcagcaaatttgcgccgttcgacg
cggaagcgaaggatttctgtaaatctggagggctatgatacggatagttcaagtatggaa
gatgatgatcttatgaggcccagatatcgttcttcaaagagtaaaggggaaaacaatgct
gcacatgatgaagtgtcagcgcggccaaagcgccagaagttatccaactctatacctcgc
cgcgaaggtttacgacccagaagatctttgcgaggaaaaaggctgcatgcataccaggaa
tctgaagatgaacaggaaagctctgatgaacagggtgcagaagatcaaagagaaaatggc
aatgagattgaggaggatgcaggtgatgatgatgaggttgatggaggcgatgaagctgaa
gcagatggagatgatgaagatggtgaggaagaacaagaaggaaggaggagatatgattta
agggatcgttcagaggttcgtagaccatcccctcgtaaggaagggaagcacaggccacaa
tctcctcgtagagtactagttcatggaattggtccaaagaacagcaaatatttaaaaaaa
ggcgggtcgcgtatgcataagcgccctcgtttctctttaccagacgattcggatgattcc
cttcttgtggatgagccggatgaaggtccatccatgccatggatgcgtagtgggagggga
ggtatgccgtggttgatgggtggattggacatgcatagtccagcagcatggggtctgaat
gttggagcatctggttggggtcaccagggtgacagttctacttcactcatgcccggggtc
caaactgcgggaccaagttccaagggaggagctgatattcagcctctgcaagttgatgag
agtgtgagttttaaagatattggtggactatcagagtacattgatgctttgaaggaaatg
gttttcttccctttgctgtatccagatttttttgcaaactaccacattactccacctaga
ggagttctgctttgtggcccgccgggtactggaaaaacattgattgcccgtgccttagct
tgtgctgcctctaaagccggccagaaggtcagtttttatatgcgcaaaggggctgatgtt
cttagtaaatgggttggagaggctgaaaggcagctcaagttactttttgaggaagctcaa
aagaatcagccatctattatattttttgatgaaattgatggcctggcacctgtgaggtct
agcaagcaggagcagattcacaattcaattgtttcgacattgcttgctttgatggatggt
cttgattcacgtgggcaagttgtcttgattggagcaactaacagaattgatgccattgat
ggagcattgcgtagacctggccgatttgatcgtgagttttattttcctttacctggctac
gaggctcgagccgaaatactggatattcatacaaggaaatggaaggatcctccaccaaag
gaactaaagatggagcttgctgttagctgtgtgggatattgtggagctgatttgaaagcg
ttgtgtactgaagcagctattagagcatttagagagaagtatcctcaggtctacacaagt
gatgacaagtttgtcattgatgttgattcggtcagtgttgagaaataccactttttggaa
gctatgtctacaataactccagctgcgcataggggatccattgtgcattcaaggccactt
tcatcagttattgctccctgtctgaagaggcatcttgataaaataatggaacggatttct
gatatttttccttttctttcatccgtagattttagcaagttctctgccctttcctatgga
tcttccattcctcttgtttatagacctcgccttttgatatgtggtggtgagagtgttgga
ctggatcatgtgggaccagctgttttgcatgaacttgagaagttttctgttcactcgttg
ggactgccttctcttctctctgatccaagtgcaaagacgcctgaagaagctcttgtgcat
atttttggggaagccaagagaacaactccatccattctctacctgcctcagttccatctt
tggtgggatacggcacacgaacagcttagggctgtgttactgactctattgaatgagtta
ccatccaaccttccagttttgttgctaggaacatcatcagtggctttcactgatctcgaa
gaagagtgtgcttccatattctcttctcgcaatatgtaccaagtggatcaaccaagttat
gatgatagattgagatacttcaatatattgtttgagtcattgctctcgttccaaacggag
gaatcaagaaacaagttaaagaaacagaaatctgctattgatcttccgaaagctccaaag
gtagtggagggtcctaaggtttcggagctaaaggctagggcagaagccgagcagcatgct
gtccgtcgaatgaggatgtgcctccgagatatttgtaaccgcattttatacaacaaaagg
ttcaatgtgtttcacttcccagtatcagaagaggaggtacctgactatcgatcagtaatt
cacaagcctatggatatggctactgtcttgcagcgggtggactctggacaataccttacc
agggcagcatttatgaatgatattgatcttattgtctcgaatgcaaagacttataatggg
aacgactacaatggatctaggatcgtcagtagagcatgtgaactccgagacgtggtgcaa
ggtatgttgtcacagatggacccgtctttggtgtccttctgtgataaaatcgcttcacag
gggggaccactgcaggttatggatgatgaagatagctccattcttcaagcagcacctgtt
gctcagctggtttctggcactagaataagtgcaaggcttcgcaatgtgcagccagaagta
aatctctcacaaagttatgaagtgcttaagcggcaaaagaaaagtgcagaaaatgaacag
ggcttgactaaagatgtggctgccagagacgaaaggtctccagaagatgtagatttgtca
aaaccaatttccccagaagaaactccaaaagaaccagattcaaatggcacactgaaagaa
gccgacaattcaccagctgaagcagcagaagtacctgctcgtcctgaacccatggagact
gacagcagtgaagttgccaccaccgtgagtactggtgacgacttactcggacagctagaa
gccctaaagcaacgctttatggagcacacggcaggctacggcgtcccacagctggagagg
ctgtattcccggataatgaaaggcgtgatagagttgacaagtaaagaaagcaatgaagat
cataggcggttagttgttagatatttgttgacatttgttgagaacagcgacaatttttaa
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