Panicum virgatum (switchgrass): 120661244
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Entry
120661244 CDS
T07260
Name
(RefSeq) 3beta-hydroxysteroid- dehydrogenase/decarboxylase-like
KO
K23558
plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase [EC:
1.1.1.418
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00100
Steroid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120661244
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.418 plant 3beta-hydroxysteroid-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
120661244
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Motif
Pfam:
3Beta_HSD
Reticulon
Epimerase
NAD_binding_10
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
120661244
NCBI-ProteinID:
XP_039795942
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Position
2N:complement(53217632..53222297)
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AA seq
566 aa
AA seq
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MATAKAGPTPGKPACAVTFGRSTLLGRHLAAALAASDRWSAVAVLDPSPFPPPPLASPLV
RHHAVDLSDPARLASAIAGAAAVFHVDATTAAVPGSDGSFLSLHRLAAEGTRRLLAACRA
AGVGRVVYTGSADVVAAGARDVVNADEDSLSYPDKFGNAVSELRAQVEMMVLSADGVDGV
QTCVLRPSNLFGPGDSSLVRFVAGYARSPLGKFVIGGGGNMSDFTYVENVAHANICAEQA
LCSNAVSVAGKPFFVTNDEPMETWEFMNCIMEAMGFQRPRINLPAKMLLFVSLFSNMIHH
RLGFQMFSTPLLHPDTIYFLSRTRFFNTSKARKLLGYYPIVSLEDGIMRTVGSFSELSDN
LGFSRKQRSCGPSKADKLLGSGTAADILLWRDEKRTFSFVTVLFVLFYWFLLSDRTFVSS
AAKFLLVTSLALFIHGVLPSQVFGFTFEKVTSDHFELSHSALRNSLMCLAYAWNGSIHKL
RVLAEGEDWSTLLKVFAFLYSAKLLLNFQFRVLLGLVLASLFIVFIVYEQCEEEIDSLVS
IASVKIKWLMDRVVDRLPASLKAYIS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgccaaggccggcccgaccccaggcaagcccgcctgcgccgttaccttcggc
cgctccaccctcctcggccgccacctcgccgccgcgctcgccgcctcggaccgctggtcg
gccgtcgccgtcctcgacccttcccctttccctcccccaccgctggcttcccccctcgtc
cgccaccacgccgtcgacctctccgaccccgcgcgtctcgcctccgcgatcgccggcgct
gcggccgtcttccatgtggacgcgacgacggcagccgtccctgggagcgacgggtccttc
ctctccctccaccgcctcgcagccgagggcacgaggcggctcctcgcggcctgccgcgcg
gccggcgtggggagggtggtgtacaccggctcggccgacgtggtggccgccggcgcccgg
gatgtggtcaatgccgacgaggactccctgtcctaccctgacaagtttgggaacgcggtg
agcgagctgagggcgcaggtggagatgatggtgctgagtgcggacggggtggacggggtg
cagacgtgcgtgttgcgcccaagcaatctgttcgggcctggcgattcgagcctggtgagg
tttgttgctggatatgcaaggtctcccttgggcaagtttgtaataggtggtggcggtaac
atgtctgactttacctatgtggaaaatgtggcccatgccaatatttgtgcggagcaagcc
ttgtgttcaaatgcagtttctgttgctgggaagcctttttttgtcaccaatgatgaacct
atggaaacatgggaatttatgaactgcataatggaagctatgggttttcagaggcccagg
attaatcttcctgccaagatgttattgtttgtatccctgttctccaatatgattcatcac
aggcttggttttcaaatgttttcaactcctcttctgcatccagatacaatatacttcttg
tcacgcacaagattttttaacacttcaaaagctagaaaattacttgggtactacccaatt
gtatcgttggaggatggaattatgagaactgtggggtcattttcagaattatcagacaat
ttgggcttctcaaggaagcaacgctcctgtggaccatcgaaggcagataaactgctagga
agtggaacagctgctgatattcttctttggagggatgaaaagagaaccttttcatttgtg
acagtattgttcgtgcttttctactggttcctgctttcagacagaacttttgtctcgtcg
gctgccaaatttcttctagtgacatcccttgctcttttcatccatggtgtgctgccttca
caagtctttggttttacatttgagaaggttacctctgatcattttgaattatcacactca
gcattgaggaattcacttatgtgcctggcttatgcatggaatgggagcattcataaactg
agggttctagcagaaggcgaagactggagtacccttttaaaggtatttgcatttttgtac
agtgcaaagctattgttgaactttcaattcagagtgctgttgggtcttgtactggcatcc
ttgttcatcgtcttcattgtctacgaacaatgcgaggaagaaattgacagcttggtgtca
attgcttctgtcaaaatcaagtggctaatggacagagtagtcgatcgtttgccagcttct
ttgaaggcatatatatcctag
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