KEGG   Panicum virgatum (switchgrass): 120661270
Entry
120661270         CDS       T07260                                 
Name
(RefSeq) DNA polymerase delta subunit 4-like
  KO
K03505  DNA polymerase delta subunit 4
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03030  DNA replication
pvir03410  Base excision repair
pvir03420  Nucleotide excision repair
pvir03430  Mismatch repair
pvir03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120661270
   03410 Base excision repair
    120661270
   03420 Nucleotide excision repair
    120661270
   03430 Mismatch repair
    120661270
   03440 Homologous recombination
    120661270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120661270
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120661270
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    120661270
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      120661270
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     120661270
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 120661270
NCBI-ProteinID: XP_039795970
LinkDB
Position
2N:complement(53629650..53631912)
AA seq 129 aa
MAFSGMKDFYRQKKKGGVTKAASSSNKKTKQYTRGASVGAPDTAQTSALVSHGSWDLKDD
FGEQEEQLRQFDMDMKFGPCIGVTRLQRWERASAMGLQPPAHLRDLLLRVPSTKDRSDPY
AGCLWEGKV
NT seq 390 nt   +upstreamnt  +downstreamnt
atggcatttagtggcatgaaagatttttaccggcagaaaaagaaaggaggtgtgaccaag
gcagcatcatcttccaataagaaaacaaagcagtacactagaggggcctccgtcggtgcc
ccagatactgctcagacatcagcactagtttctcatggctcctgggatctcaaagatgat
tttggtgagcaagaggagcagctgcggcaattcgacatggacatgaagtttggcccatgt
attggtgtcacccggcttcagcgctgggagcgcgcttctgccatgggcctccagccacca
gcccatctccgggatctcttgctgcgtgttccatcaacgaaggatcgcagtgatccttat
gccgggtgcctatgggagggtaaagtctag

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