Panicum virgatum (switchgrass): 120661302
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Entry
120661302 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 49-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120661302
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120661302
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120661302
NCBI-ProteinID:
XP_039796048
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Position
2N:complement(54000057..54002085)
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AA seq
538 aa
AA seq
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MAACHCPEPAQCHHRPLLPAAASYPKLHDRPRPAPGSVLAEVAAILCLTGPMVGAGILFY
MRSLVSMVFLGRLGQLPLAGGSLALGFANITGYSVLSGLAGGMDPVCGQAFGAGRTDLLR
AALRRTVLLLLAASVPIGMLWVAMHRVLVSTGQDADIAAAAYAYILCCLPDLAVQCFLHP
IRIYLRAQSVTLPLTYGAAAALLLHVPINFLLVNVLGLGIRGVALGGAWTNLNFLLFLVA
YVYFRGMYGAHDDDDAGGAKKGAPEAPPAEEEEEGAKEWWSLVRLCVHSCMSVCLEWWWY
EIMVLLCGVLIDPKAAVAAMGVLIQTTSLIYIFPHSLGCAVSTRVGHELGAGRPERARLV
ARVGLGLGAALGLVACAFAVSVRGVWARMFTTDEVILKLAAAALPLLGLAELGNCPQTAG
CGVLRGSARPEKAARINVSAFYGAGMPVALALAFWPAGLDFRGMWGGMLAAQLVCAALML
RAVLGTDWTEQTERARQLTGGRGDGFDVVGIVDEDKRSHAKAAKAEVGNTLFMVADCV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtgccactgcccggagccggcgcaatgccaccacaggccgctcctcccggcg
gccgccagctaccctaagctgcacgaccgcccgaggccggcgcccggcagcgtcctcgcc
gaggtggccgccatcctctgcctcacggggccaatggtcggcgcggggatcctgttctac
atgcgctccctcgtgtccatggtgttcctcggccgcctcggccagctgcccctcgccggc
ggctccctcgcgctcggcttcgccaacatcaccggctactccgtcctctccggcctcgcc
ggcgggatggaccccgtctgcggccaggcgttcggggccggccgcacagacctcctccgc
gccgcgctccgccgcaccgtcctgctgctccttgccgcgtccgtgcccatcggcatgctc
tgggtggccatgcaccgggtcctcgtctccacgggccaggacgccgacatcgccgccgcg
gcgtacgcctacatcctctgctgcctcccggacctcgcggtgcagtgcttcctccacccg
atccgcatctacctccgcgcgcagtccgtcacgctgccgctcacctacggagccgccgcg
gcgctgctcctccacgtgcccatcaacttcctcctcgtcaacgtcctcggcctcggcatc
cgcggcgtcgcgctcggcggcgcctggaccaacctcaacttcctgctattcctcgtggcg
tacgtctacttccgcggaatgtacggcgcccatgacgacgacgacgccggcggcgccaag
aagggcgcgcccgaggcgccgccggcagaggaggaggaggagggcgccaaggagtggtgg
agcctggtgaggctgtgcgtgcacagctgcatgtccgtctgcctggagtggtggtggtac
gagatcatggtgctcctctgcggcgtgctcatcgaccccaaggcggcggtggcggcaatg
ggcgtgctcatccagaccacgtcgctgatatacatcttcccgcattcgctcggctgcgcc
gtgtccacgcgcgtcgggcacgagctgggcgccggaaggccggagcgcgcgcgcctcgtc
gcgcgcgtcgggctcggcctgggcgccgcgctcggcctcgtggcctgcgcattcgcggtg
tccgtgcgcggcgtctgggcgcggatgttcacgacggacgaggtcatcctcaagctggcg
gccgcggcgctgccgctgctcggcctggccgagctgggcaactgcccccagaccgccggg
tgcggcgtgctgcgcggcagcgcgcggcccgagaaggcggcgcggatcaacgtctcggcg
ttctacggcgcgggcatgcccgtggcgctggcgctggccttctggccggctgggctggac
ttccgcgggatgtggggcggcatgctggccgcgcagctcgtctgcgccgcgctgatgctg
cgcgccgtgctcggcaccgactggacggagcagacggagcgcgcccgccagctcaccggc
gggcgcggcgacggctttgacgtcgtcggcattgtcgacgaggacaaaagaagccatgca
aaagcggccaaagcagaggtcgggaacacattgttcatggtggcggattgcgtctag
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