Panicum virgatum (switchgrass): 120661306
Help
Entry
120661306 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120661306
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120661306
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120661306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
VPS18_RING_C
zf-RING_16
zf_RING_Vps8
zf-ANAPC11
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
120661306
NCBI-ProteinID:
XP_039796053
LinkDB
All DBs
Position
2N:complement(54076431..54079997)
Genome browser
AA seq
175 aa
AA seq
DB search
MATPTTYSVRVSSETHKVEEWLTSDEALAWQLQEEENTRDAAADTRESAGNVSLEPSSPA
VQYRPAQNAAQVAREDNVDPDNMSYEQLQALGEAVGTQSRGLSDDLIAYLEPFRHKCTFF
SRKKNSEECVICKTTYKSRQKMIRLPCSHCYHANCISRWLKINKACPVCNEEVFG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcccaccacctactcggtccgcgtctcctcggagacccacaaggtcgaggaa
tggctgacgtctgacgaagctctggcctggcagctgcaggaggaggagaacacgcgcgat
gccgctgccgacaccagagaatccgccggtaacgtgtccttggagccatcgtcaccggct
gttcagtacaggcctgcgcagaatgcagctcaggtggcacgggaagacaatgttgaccct
gataatatgtcttacgagcaactacaagcattaggcgaagcagttggaactcagtccaga
ggattatctgatgacctgatagcttacttggagccatttaggcacaagtgcacctttttc
tcgagaaaaaagaacagtgaagaatgcgtgatctgcaaaacgacctataaaagccggcag
aagatgataaggctaccctgcagccattgttatcatgcaaactgcattagtcggtggctt
aagatcaacaaggcatgcccagtctgcaacgaggaagtatttggatga
DBGET
integrated database retrieval system
