Panicum virgatum (switchgrass): 120661321
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Entry
120661321 CDS
T07260
Name
(RefSeq) vacuolar protein sorting-associated protein 22 homolog 1-like
KO
K12188
ESCRT-II complex subunit VPS22
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120661321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120661321
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120661321
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
120661321
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120661321
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Paralog
GFIT
Motif
Pfam:
EAP30
CDK5RAP3
Exo70_C
Motif
Other DBs
NCBI-GeneID:
120661321
NCBI-ProteinID:
XP_039796071
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Position
2N:54280978..54285855
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AA seq
251 aa
AA seq
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MRRRPGIAGLQNAAATRDQFRLVGENVAKVRTDVMKEQLATFRSQLEEFARKHKSDIRKN
PIFRQQFHEMCAKVGVDPLASNKGVWAELLGIGDFYYELGVQIVDICIATRSHNGGLIDL
LDLRKLLCQKRKATLESLSEDDCLRAISKLKVLGSGFEVISVGRRKLVRSVPTELNKDHS
GILGLAQAEGYVTVEQVEKEFSWSTGRAIDALETLLKEGLAMIDDGHRDGKRRYWFPCVT
VSSDTTSGEAK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggcggccggggatcgctggcttgcagaatgcagcggctactcgtgaccaattc
cggctggtgggggagaatgtggccaaggtcaggaccgatgtgatgaaggagcaacttgcg
acattcaggtcacagctcgaggaatttgctcgaaagcataagagcgacattcgtaaaaat
ccgatatttagacagcagttccatgagatgtgtgcaaaagttggagtagatccgctggca
tctaataaaggagtttgggcagaacttctagggattggtgacttctactatgaacttgga
gttcagatagttgacatatgcattgcaactagatcgcataatggtggcctgattgacttg
ctagatctccgcaaacttctctgtcagaagagaaaagctactcttgaatcattatctgaa
gatgactgtttacgtgctataagtaagctaaaagtccttggtagtggctttgaagtaatt
tctgttgggaggagaaagcttgtgcggtcagttcctactgaattaaataaagaccacagt
gggatactagggctagcacaggctgaaggctatgtcacagtagaacaagttgaaaaggaa
ttctcatggtctactggacgggcaattgatgcccttgaaactttacttaaggagggactt
gctatgatcgacgatggccacagggatggcaagcgtagatattggttcccatgcgtcact
gtcagttccgacacaaccagcggtgaagccaagtaa
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