Panicum virgatum (switchgrass): 120661349
Help
Entry
120661349 CDS
T07260
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120661349
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120661349
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120661349
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120661349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
GvpG
MRC1
Motif
Other DBs
NCBI-GeneID:
120661349
NCBI-ProteinID:
XP_039796110
LinkDB
All DBs
Position
2N:complement(54713048..54718758)
Genome browser
AA seq
682 aa
AA seq
DB search
MPTPKQRLPYSTAGGGGGGRRGASGSGVLPPVVVLVFLFVVAPSLFFVVCNGGRGHVHVA
SDPKVRNDDQEAVAMMNLKSILPKEVIDAIAASQQEKGTLSVDFFRNHESPSWKTDDLVT
DKGMNVDDKAKAENSAAEHDLPTNNSPKDPDEHQVDTAAKIARRKLREKRREKRAMDLLS
KDDEARVKLENAAIERSKAVDSAVLGKYSIWRKENENENSDTTVRLIRDQIIMARVYSAL
AKSKNKSGLFQELQTRIKESQRAVGEAAADADLHHSAPEKIRAMGQVLSKAREEVYDCRA
ITQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNSIHCLSMRLTIDYYLLPLEKRKFP
RSENLENPSLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHLVTDKLNFGAMNMWFLL
NPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKADRPTTLSAGSSNLKYRNP
KYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWDVDLNGNVNGAVETCGESFH
RFDKYLNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQNKNEDRVLWKL
GTLPPGLLTFYKLTHPLDKSWHVLGLGYNPSIDRSEIDGAAVVHYNGNMKPWLELAMTKY
RPYWTKYIKYDHPYIRGCNLSE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccccgaagcagcggctcccctactccaccgccggcgggggcggaggggggagg
cgcggcgcctccggctccggcgtgctgccccccgtggtggtcctcgtgttcctcttcgtg
gtcgcgccgtcgctcttcttcgtcgtgtgcaatggaggccgcggccacgtccacgtcgcc
tccgatcccaaggttaggaatgatgatcaggaagcagttgcaatgatgaatctaaaatct
attttgccaaaggaggtgattgatgctatagctgctagtcaacaagaaaaaggcacattg
agtgttgacttttttaggaatcatgaatctccctcatggaaaactgatgatctagtcact
gacaagggcatgaatgtcgatgacaaggctaaagctgaaaacagtgcagcagaacatgat
ttaccaacaaataattcacccaaagatccagatgaacatcaagttgacacagcagcaaaa
atagctcgaaggaaactgagggagaagaggcgtgagaagagagcaatggatttgctgagt
aaagatgatgaagcgcgtgttaagctggagaatgccgctattgagcgatcaaaggctgtc
gattctgctgtgcttgggaaatatagcatatggaggaaagagaatgagaatgagaattca
gacactacagttaggttgataagggaccaaattattatggctcgtgtctattctgcgctt
gctaaatcaaagaacaagagtgggctgtttcaagaactgcagacccgaatcaaggaaagc
cagcgggctgttggagaggctgctgctgatgctgacctgcatcacagcgctcctgagaaa
atcagagcaatgggtcaagttttatcaaaggctagagaagaagtgtacgattgcagagct
ataactcagaggctgagggctatgcttcagtcagctgatgaacaggtcaggagcttgaag
aagcagagtacatttcttagccagttggctgcaaagacaattccaaatagcattcactgc
ttgtctatgcgactgacaattgattactatctcctccccctggagaaacggaaattccca
aggagtgagaacttagaaaacccaagtctctaccactatgcacttttctcagacaacgtc
ttggcagcttctgttgttgtgaactcgaccatcatgaatgccaaggaaccagagaaacat
gttttccatcttgtgactgataagttaaactttggagccatgaacatgtggtttctgctg
aacccaccgggcaaggccaccatccatgttgagaatgtggacgaatttaagtggttgaac
tcatcgtactgtcctgtgctgcggcaacttgagtctgctgccatgaaagagtactatttc
aaagctgatcgccccaccactctctcagcaggttcctcaaacctaaagtatcggaacccc
aagtacctctctatgctgaaccacttgaggttttatctcccagaggtctatccaaagttg
gataagatacttttccttgatgatgacatagttgtgcagaaagatttgacagggttgtgg
gatgttgatcttaatggaaatgtcaatggtgctgtggagacctgtggggagagtttccac
cgttttgacaagtaccttaatttttcaaatccacatattgctcggaactttgatccaaat
gcatgcggctgggcttatgggatgaacatctttgatctgaaggagtggaagaagaaagat
attactgggatctaccacaaatggcaaaacaagaatgaagacagagttctttggaagctt
gggacacttccgcctggcctcttgaccttctacaaattgacgcatcccctggataagtcc
tggcacgttcttggattaggatacaacccaagcatagaccgttcggagatagacggtgct
gctgttgttcattacaatgggaacatgaagccatggttggagctggcaatgaccaagtac
cgaccatattggaccaagtatatcaagtatgatcacccctacatccgtggatgcaacttg
agtgagtag
DBGET
integrated database retrieval system
