Panicum virgatum (switchgrass): 120661351
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Entry
120661351 CDS
T07260
Name
(RefSeq) two-component response regulator-like PRR95
KO
K12130
pseudo-response regulator 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120661351
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GFIT
Motif
Pfam:
Response_reg
CCT
Jas_motif
Motif
Other DBs
NCBI-GeneID:
120661351
NCBI-ProteinID:
XP_039796117
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Position
2N:complement(54763722..54768396)
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AA seq
623 aa
AA seq
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MGEGADEALKVVDLEDGEGEEEAAAAGSSRETRMLPRMPVRVLLAEGDDSTRHVISALLR
KCGYRVAAASDGVKAWDTLQEKSFNIDLVLTEVDLPLMSGFLLLSTIMEHDASKNIPVIM
MSSHDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQLANGGPDVQHIQHEENLA
ERIEQKIAVTKVDNLNKDGACKDRECSEQESDAQSSCTRSELEAESKQTNNILEYKQPTE
RQFFIPSHKNGKLSGQTKLRSNNLIPTREDYLSPKKRACLNDNHFEKSSRDIEVVHIIDN
QQKHDMQREVDTMRTTSTGNDEKGSIPAHLLELSLRRTDYGKLENQEKNDRRMLNHSTSS
AFSLYNCRTASTLGNAGDGQLCSTSETQADVENKNGDSAAPSHDITETNRPIRVVPFPVP
VQGLTFDGQPFWNGTPVASLFYSQSAPPIWNSKTSMWQESTPQATPVQKSQQNEPNEMGP
KPVQSAEEQSQRSHPSSNGKQLRVEIPKDEARHVSPMTGESGTSTVLDSARNTLSVSGCD
SNSNRIPAPTESSNTFQGVPETPSAEGSRHLSQREAALNKFRLKRKDRCFEKKVRYQSRK
LLAEQRPRVKGQFVRQDHSIQGS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaggagcggatgaggcgttgaaggtggtggatttggaggacggggagggggag
gaggaggctgcagcggcggggtcgagcagggagacgcggatgctgcccaggatgccggtg
cgggtgctgctcgccgagggagacgactccacgcgccacgtcatctccgcgctgctccgc
aagtgcggctaccgagttgctgcggcctctgatggtgtgaaggcgtgggacacactgcag
gaaaaatcattcaacatagaccttgttttaactgaagttgatttgcctttgatgtctggt
ttcctcctgttatccacaatcatggagcatgatgcgtccaagaacatccccgttataatg
atgtcctcgcacgattcagtaagcatggttttcaaatgcatgctcaagggtgcagcagat
ttccttgtcaagccgataagaaagaatgagttaaggaacttatggcagcacgtttggaga
aaacaactggcaaatggtgggcctgatgtgcagcatatacagcacgaagagaatcttgca
gaaagaattgaacagaagattgctgtgacaaaagttgataatttgaacaaagatggggcc
tgtaaagatagagaatgcagtgaacaagaaagtgatgctcaaagttcttgcacaaggtca
gagctggaggctgaaagtaagcaaactaacaatattttggagtataagcaaccaactgaa
aggcaattctttattcctagccacaagaacggcaagttaagtggacagaccaaacttaga
agtaataacttgattccaacaagagaagattatttatcaccaaagaaaagggcatgtttg
aatgataatcattttgagaaatcttccagagatattgaggtagtccacattattgacaat
caacagaagcatgacatgcagagggaggtggatactatgagaacaacatctactggaaat
gacgagaagggctccattccagcacacctgttggaactatctctcagaagaactgactat
ggtaaattagagaaccaggagaaaaatgatagaagaatgctgaatcattctacttcgtct
gcattctccttgtataactgtaggactgcgtccacattaggaaatgctggcgatggtcag
ttatgtagcacctcagaaacacaagcggacgtggaaaacaaaaatggagattcggcagcc
ccctctcatgacattactgaaacaaatcgtcctattagagttgtaccatttcctgtccct
gttcaaggtctcacatttgatgggcagccattctggaatggtacaccagtggcatcccta
ttctactcacagtccgctcctcccatttggaatagcaaaacatccatgtggcaagaatca
accccacaagcaaccccagtgcagaagtcacaacagaatgagccaaatgaaatgggccct
aagccagttcaaagtgcagaggaacaatctcagagaagtcatcctagttccaatgggaag
caactgcgtgttgaaattcctaaagatgaggcacggcatgtttctcctatgactggtgaa
agcggaactagcaccgtgcttgacagcgctagaaatactctcagcgtcagcggctgtgac
agcaattccaaccggatccctgcccctactgaatcgtccaacacatttcagggtgttcct
gaaaccccaagtgctgaaggttcacgtcacctgagccagagagaggctgcactgaacaaa
ttccggctaaagaggaaggataggtgctttgagaagaaggttcggtaccagagcaggaaa
ttactcgcagagcagcggccacgggtcaagggccagtttgttcgtcaagatcatagcatc
caaggaagttga
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