Panicum virgatum (switchgrass): 120661354
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Entry
120661354 CDS
T07260
Name
(RefSeq) pentatricopeptide repeat-containing protein At4g01400, mitochondrial-like
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120661354
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
120661354
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GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
120661354
NCBI-ProteinID:
XP_039796136
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Position
2N:54793598..54794997
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AA seq
344 aa
AA seq
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MSMLPSPPAISPARLHKLVTSQPDPLLALELVNVTSPTTTPHPATLHSLLLRLARRRDHL
PHALALLRRLPDPPSPRLLLPVLLAVLRLRRPPQLFLSTFNSLFVSGPSPLPLHPQLLLR
LLSVLSSTASHFLSALHLLRLVSSRLPLPSPLVLASHNLLIEAAARSGHVAVSLSLFHRI
RSLNVSPDADSYRILTQSLCRKAQVRTAATLLDEMLHRGIPADPLAYTTVLNALCRKKQL
LEAYRLLCLMRGRGVSPDIVHYNTVIVGMCREGRPLDACKVVGDMVESGCTPNAATYVTL
VNGLCVSGLYEKAETYLVDMVGKGLVPHFCVSLSYQGLLCSWQS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgctcccatcgccgccggcgatctcgccggcgcggctgcacaagctggtgacg
tcgcagccggacccgctcctcgcgctggagctcgtcaacgtcacctccccgaccaccacg
ccgcaccctgccacgctccactccctcctgctccgcctcgcccgccgccgcgaccaccta
ccccacgcgctagcgctcctccgccgcctcccagacccgccgtccccgcgcctcctgctc
ccggtcctcctcgctgtgctccgcctccgccggccacctcagctttttctctccaccttc
aactccctcttcgtctccggccccagccccctgccgctccaccctcagctcctcctccgc
ctcctcagcgtcctctcctccaccgcctcccacttcctgtccgcgctacaccttctccgc
ctcgtctcctcgcggctacccctcccctcaccgctcgtcctcgcctcccacaacttgcta
atcgaggccgctgctcgttccggtcacgtcgccgtttcactctccctcttccaccgtatc
cgctcacttaatgtatcccccgacgccgactcctaccgcattcttacccagtcactctgc
cgcaaggcccaggtccgcactgcggctacactgctcgacgaaatgctgcacaggggcatc
cccgccgatccgctggcgtacaccaccgtgttgaacgccctgtgccgcaagaagcagctc
ctagaggcatatcgcttgctctgtctcatgcgaggccgtggagtttcccctgacattgtg
cattacaacacggtcattgttgggatgtgccgcgaggggcggccactggatgcatgcaag
gttgttggtgatatggtggagagtggatgcacaccaaatgcagcaacatatgtgacattg
gtgaatgggttgtgcgtaagtggattatacgaaaaggcagagacttacctggtggatatg
gtgggtaaagggcttgtgccacatttctgtgtttcactcagttatcaagggttgttgtgc
agttggcaaagttaa
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