Panicum virgatum (switchgrass): 120661355
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Entry
120661355 CDS
T07260
Name
(RefSeq) MYB-like transcription factor ODO1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120661355
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120661355
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120661355
NCBI-ProteinID:
XP_039796138
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Position
2N:complement(54812689..54817408)
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AA seq
269 aa
AA seq
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MGRQPCCDKLGVKRGPWTAEEDRKLISFILSNGHCCWRAVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGLLTDAEEQAVIDLHAKLGNRWSKIAAKLPGRTDNEIKNHWNTHIKKKLIKMG
IDPVTHETLDPKTSSPATTQSVVTADSTKSDEATKQQSPQSDAMRDVLADGSSPTESSAN
TVNTGGSINSSHDQDPLVKWLLEEDPPTGDEPWLNFTGSVDVDELSSIAAGPELPWDGAT
DWLLDYQDFGLGDSSLVDGYMINSSNGAN
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggggcggcagccgtgctgcgacaagctgggggtgaagcgggggccgtggacggcggag
gaggaccggaagctcatcagcttcatcctgagcaacggccattgctgctggcgcgcggtg
ccgaagctagccggcctgctgcgctgcggcaagagctgccgcctgcgctggaccaactac
ctccgcccggacctcaagcgcggcctcctcaccgacgccgaggagcaggccgttatcgac
ctccacgccaagctcggcaacagatggtcaaagattgctgccaagctaccgggaaggact
gacaacgagatcaagaaccactggaacacccacatcaagaagaagctgatcaagatgggc
atcgacccggtcacgcacgagaccctcgacccgaagaccagcagcccggccacaacgcag
tccgtcgtcacggccgattcaaccaagtccgacgaggcgaccaagcagcagagcccgcag
agcgacgccatgagggacgtgttggccgacggttccagtccgacggaatcgagcgcgaac
accgtcaacacgggcggaagcatcaacagcagccacgaccaggacccgctggtgaagtgg
ctcctggaagaggacccgcccaccggcgacgagccgtggctcaacttcaccggcagtgtc
gacgtggacgagctcagcagcatcgccgccggtccggagttgccgtgggacggcgccacc
gactggctgctcgactaccaagattttggattgggggactcgagcttggtcgatggctac
atgatcaacagctcaaacggagcaaattaa
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